Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC104333.2-201ENST00000422630 192 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 MRPS18CP6-201ENST00000423587 223 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 AC097713.2-201ENST00000430199 356 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 MTND5P15-201ENST00000434246 349 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 AC127537.2-201ENST00000439258 465 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 AL359672.1-201ENST00000442302 409 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 FHP1-201ENST00000442741 703 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 FABP5P13-201ENST00000452144 328 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 snoU13.7-201ENST00000459220 104 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 RNA5SP103-201ENST00000459503 118 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 RPL9P32-201ENST00000464118 620 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 RPL39P38-201ENST00000467018 153 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 AC022034.3-201ENST00000471393 478 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 GZMAP1-201ENST00000503054 631 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 CDH12P4-201ENST00000517835 295 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 CDH12P3-201ENST00000517935 295 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 CDH12P1-201ENST00000518435 295 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 AP003385.6-201ENST00000531603 374 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 AC092079.1-201ENST00000558620 1985 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 HMGB3P26-201ENST00000560051 582 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 SUB1P3-201ENST00000564581 315 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 MIR4700-201ENST00000578311 74 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 MIR4737-201ENST00000583979 81 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 AC005191.1-201ENST00000603950 358 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 AC083843.3-201ENST00000623679 2186 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 AL122126.1-201ENST00000546905 1318 ntBASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 AL157777.2-201ENST00000258070 137 ntBASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 RNVU1-3-201ENST00000364313 161 ntBASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 RNU6-946P-201ENST00000383878 107 ntBASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 MT-TW-201ENST00000387382 68 ntBASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 AC011816.1-201ENST00000441346 546 ntBASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 CYCSP34-201ENST00000458172 304 ntBASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 AC117503.1-201ENST00000472241 394 ntBASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 AC108860.1-201ENST00000484521 383 ntBASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 AP001086.1-201ENST00000494882 321 ntBASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 RNU2-69P-201ENST00000516061 100 ntBASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 RNU6-182P-201ENST00000516970 105 ntBASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 AC025588.3-201ENST00000604182 274 ntBASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 AL158032.1-201ENST00000605401 106 ntBASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 HMGN2P28-201ENST00000606102 262 ntBASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 AL589994.2-201ENST00000621124 579 ntBASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 CR381572.2-201ENST00000624852 397 ntBASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 AC000123.3-201ENST00000624029 4975 ntBASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSBP3Q9BWW4 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.06□□□□□ -1.76
SSBP3Q9BWW4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SSBP3Q9BWW4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSBP3Q9BWW4 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSBP3Q9BWW4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SSBP3Q9BWW4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.06□□□□□ -1.76
SSBP3Q9BWW4 AP001642.1-201ENST00000624727 2117 ntBASIC4.06□□□□□ -1.76
SSBP3Q9BWW4 AC126323.6-202ENST00000568092 3511 ntBASIC4.06□□□□□ -1.76
SSBP3Q9BWW4 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.06□□□□□ -1.76
SSBP3Q9BWW4 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SSBP3Q9BWW4 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.06□□□□□ -1.76
SSBP3Q9BWW4 Y_RNA.222-201ENST00000364264 102 ntBASIC4.06□□□□□ -1.76
SSBP3Q9BWW4 Y_RNA.276-201ENST00000364732 109 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms