Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
ABCA3Q99758 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
ABCA3Q99758 Y_RNA.295-201ENST00000364918 102 ntBASIC2.02□□□□□ -2.09
ABCA3Q99758 MIR598-201ENST00000384868 97 ntBASIC2.02□□□□□ -2.09
ABCA3Q99758 MIR517C-201ENST00000385103 95 ntBASIC2.02□□□□□ -2.09
ABCA3Q99758 MT-TP-201ENST00000387461 68 ntBASIC2.02□□□□□ -2.09
ABCA3Q99758 AL138880.1-201ENST00000405824 642 ntBASIC2.02□□□□□ -2.09
ABCA3Q99758 RNU6-1077P-201ENST00000410506 102 ntBASIC2.02□□□□□ -2.09
ABCA3Q99758 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.02□□□□□ -2.09
ABCA3Q99758 AL031659.1-201ENST00000447075 539 ntBASIC2.02□□□□□ -2.09
ABCA3Q99758 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.02□□□□□ -2.09
ABCA3Q99758 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.02□□□□□ -2.09
ABCA3Q99758 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.02□□□□□ -2.09
ABCA3Q99758 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.02□□□□□ -2.09
ABCA3Q99758 AF131216.2-201ENST00000512316 564 ntBASIC2.02□□□□□ -2.09
ABCA3Q99758 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.02□□□□□ -2.09
ABCA3Q99758 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.02□□□□□ -2.09
ABCA3Q99758 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
ABCA3Q99758 CD24P4-201ENST00000382840 243 ntBASIC2.01□□□□□ -2.09
ABCA3Q99758 SSR1P1-201ENST00000407630 814 ntBASIC2.01□□□□□ -2.09
ABCA3Q99758 MED6P1-201ENST00000439659 713 ntBASIC2.01□□□□□ -2.09
ABCA3Q99758 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.01□□□□□ -2.09
ABCA3Q99758 AC016957.1-201ENST00000534895 309 ntBASIC2.01□□□□□ -2.09
ABCA3Q99758 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.01□□□□□ -2.09
ABCA3Q99758 OR4K8P-201ENST00000578842 1048 ntBASIC2.01□□□□□ -2.09
ABCA3Q99758 AL713998.2-201ENST00000604538 1198 ntBASIC2.01□□□□□ -2.09
ABCA3Q99758 OR4G11P-202ENST00000642116 1414 ntBASIC2.01□□□□□ -2.09
ABCA3Q99758 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
ABCA3Q99758 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
ABCA3Q99758 AC135776.4-201ENST00000624300 1904 ntBASIC2.01□□□□□ -2.09
ABCA3Q99758 ZNF209P-201ENST00000593450 2304 ntBASIC2.01□□□□□ -2.09
ABCA3Q99758 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
ABCA3Q99758 SNORA14A-201ENST00000364773 135 ntBASIC2□□□□□ -2.09
ABCA3Q99758 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2□□□□□ -2.09
ABCA3Q99758 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2□□□□□ -2.09
ABCA3Q99758 AL354695.1-201ENST00000427935 228 ntBASIC2□□□□□ -2.09
ABCA3Q99758 RNU4ATAC11P-201ENST00000515939 126 ntBASIC2□□□□□ -2.09
ABCA3Q99758 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2□□□□□ -2.09
ABCA3Q99758 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2□□□□□ -2.09
ABCA3Q99758 AC116563.2-201ENST00000624751 535 ntBASIC2□□□□□ -2.09
ABCA3Q99758 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2□□□□□ -2.09
ABCA3Q99758 RNA5SP139-201ENST00000364340 117 ntBASIC2□□□□□ -2.09
ABCA3Q99758 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2□□□□□ -2.09
ABCA3Q99758 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
ABCA3Q99758 ERHP2-201ENST00000402323 299 ntBASIC2□□□□□ -2.09
ABCA3Q99758 MTATP6P4-201ENST00000427725 675 ntBASIC2□□□□□ -2.09
ABCA3Q99758 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
ABCA3Q99758 UBBP3-201ENST00000445497 241 ntBASIC2□□□□□ -2.09
ABCA3Q99758 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2□□□□□ -2.09
ABCA3Q99758 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2□□□□□ -2.09
ABCA3Q99758 IGKV2D-36-201ENST00000518643 226 ntBASIC2□□□□□ -2.09
ABCA3Q99758 NBEAP1-201ENST00000554452 979 ntBASIC2□□□□□ -2.09
ABCA3Q99758 AC012493.3-201ENST00000604494 112 ntBASIC2□□□□□ -2.09
ABCA3Q99758 AC080078.3-201ENST00000605407 463 ntBASIC2□□□□□ -2.09
ABCA3Q99758 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
ABCA3Q99758 AC096656.1-201ENST00000623826 1364 ntBASIC1.99□□□□□ -2.09
ABCA3Q99758 AC006026.1-201ENST00000444025 1803 ntBASIC1.99□□□□□ -2.09
ABCA3Q99758 U8.1-201ENST00000362843 134 ntBASIC1.99□□□□□ -2.09
ABCA3Q99758 SNORA67.1-201ENST00000364749 141 ntBASIC1.99□□□□□ -2.09
ABCA3Q99758 AL356057.2-201ENST00000403318 432 ntBASIC1.99□□□□□ -2.09
ABCA3Q99758 HMGB3P2-201ENST00000411913 584 ntBASIC1.99□□□□□ -2.09
ABCA3Q99758 MTND1P23-201ENST00000416931 372 ntBASIC1.99□□□□□ -2.09
ABCA3Q99758 HSFY3P-201ENST00000444242 1191 ntBASIC1.99□□□□□ -2.09
ABCA3Q99758 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.99□□□□□ -2.09
ABCA3Q99758 AL513343.1-201ENST00000451818 792 ntBASIC1.99□□□□□ -2.09
ABCA3Q99758 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.99□□□□□ -2.09
ABCA3Q99758 AC025423.2-201ENST00000537570 439 ntBASIC1.99□□□□□ -2.09
ABCA3Q99758 MIR151B-201ENST00000584249 96 ntBASIC1.99□□□□□ -2.09
ABCA3Q99758 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.99□□□□□ -2.09
ABCA3Q99758 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
ABCA3Q99758 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
ABCA3Q99758 RNU6-50P-201ENST00000362356 103 ntBASIC1.98□□□□□ -2.09
ABCA3Q99758 SNORA67.6-201ENST00000391093 99 ntBASIC1.98□□□□□ -2.09
ABCA3Q99758 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.98□□□□□ -2.09
ABCA3Q99758 MTND4P11-201ENST00000417020 1058 ntBASIC1.98□□□□□ -2.09
ABCA3Q99758 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.98□□□□□ -2.09
ABCA3Q99758 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.98□□□□□ -2.09
ABCA3Q99758 AL513321.1-201ENST00000441175 761 ntBASIC1.98□□□□□ -2.09
ABCA3Q99758 HMGN1P8-201ENST00000463578 288 ntBASIC1.98□□□□□ -2.09
ABCA3Q99758 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.98□□□□□ -2.09
ABCA3Q99758 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.98□□□□□ -2.09
ABCA3Q99758 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.98□□□□□ -2.09
ABCA3Q99758 AC007115.1-201ENST00000546853 234 ntBASIC1.98□□□□□ -2.09
ABCA3Q99758 AL137100.2-201ENST00000555786 315 ntBASIC1.98□□□□□ -2.09
ABCA3Q99758 MIR5694-201ENST00000581190 76 ntBASIC1.98□□□□□ -2.09
ABCA3Q99758 AC090616.5-202ENST00000582111 297 ntBASIC1.98□□□□□ -2.09
ABCA3Q99758 AC084373.1-201ENST00000603311 235 ntBASIC1.98□□□□□ -2.09
ABCA3Q99758 DUXAP9-208ENST00000622815 614 ntBASIC1.98□□□□□ -2.09
ABCA3Q99758 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ABCA3Q99758 DNAJC19P6-201ENST00000401853 280 ntBASIC1.97□□□□□ -2.09
ABCA3Q99758 TPMTP3-201ENST00000411928 735 ntBASIC1.97□□□□□ -2.09
ABCA3Q99758 RPL26P37-201ENST00000411983 438 ntBASIC1.97□□□□□ -2.09
ABCA3Q99758 AL121871.1-201ENST00000443413 436 ntBASIC1.97□□□□□ -2.09
ABCA3Q99758 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.97□□□□□ -2.09
ABCA3Q99758 MTCO1P47-201ENST00000523889 1271 ntBASIC1.97□□□□□ -2.09
ABCA3Q99758 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.97□□□□□ -2.09
ABCA3Q99758 AL592494.3-201ENST00000609485 464 ntBASIC1.97□□□□□ -2.09
ABCA3Q99758 AL390240.1-201ENST00000612950 384 ntBASIC1.97□□□□□ -2.09
ABCA3Q99758 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.97□□□□□ -2.09
ABCA3Q99758 AC011477.1-204ENST00000623416 1325 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms