Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.15□□□□□ -2.23
COL12A1Q99715 AL020996.3-201ENST00000606617 222 ntBASIC1.15□□□□□ -2.23
COL12A1Q99715 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
COL12A1Q99715 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
COL12A1Q99715 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
COL12A1Q99715 Y_RNA.85-201ENST00000363014 111 ntBASIC1.14□□□□□ -2.23
COL12A1Q99715 RNU6-115P-201ENST00000364310 107 ntBASIC1.14□□□□□ -2.23
COL12A1Q99715 USP9YP33-201ENST00000412220 421 ntBASIC1.14□□□□□ -2.23
COL12A1Q99715 USP9YP35-201ENST00000435696 412 ntBASIC1.14□□□□□ -2.23
COL12A1Q99715 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.14□□□□□ -2.23
COL12A1Q99715 AC025755.1-201ENST00000521306 278 ntBASIC1.14□□□□□ -2.23
COL12A1Q99715 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.14□□□□□ -2.23
COL12A1Q99715 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC1.14□□□□□ -2.23
COL12A1Q99715 SEPT7P9-203ENST00000604116 343 ntBASIC1.14□□□□□ -2.23
COL12A1Q99715 AC104307.1-201ENST00000616142 196 ntBASIC1.14□□□□□ -2.23
COL12A1Q99715 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.14□□□□□ -2.23
COL12A1Q99715 AC111188.2-201ENST00000529697 1387 ntBASIC1.14□□□□□ -2.23
COL12A1Q99715 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
COL12A1Q99715 Z85995.1-201ENST00000415547 335 ntBASIC1.14□□□□□ -2.23
COL12A1Q99715 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.14□□□□□ -2.23
COL12A1Q99715 AC006483.1-201ENST00000487308 313 ntBASIC1.14□□□□□ -2.23
COL12A1Q99715 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC1.14□□□□□ -2.23
COL12A1Q99715 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.14□□□□□ -2.23
COL12A1Q99715 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC1.14□□□□□ -2.23
COL12A1Q99715 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.14□□□□□ -2.23
COL12A1Q99715 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
COL12A1Q99715 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.14□□□□□ -2.23
COL12A1Q99715 AC009965.2-201ENST00000425328 970 ntBASIC1.14□□□□□ -2.23
COL12A1Q99715 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.14□□□□□ -2.23
COL12A1Q99715 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.14□□□□□ -2.23
COL12A1Q99715 Y_RNA.48-201ENST00000362710 103 ntBASIC1.13□□□□□ -2.23
COL12A1Q99715 RNU6-35P-201ENST00000384530 107 ntBASIC1.13□□□□□ -2.23
COL12A1Q99715 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.13□□□□□ -2.23
COL12A1Q99715 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.13□□□□□ -2.23
COL12A1Q99715 AL590095.2-201ENST00000604136 117 ntBASIC1.13□□□□□ -2.23
COL12A1Q99715 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
COL12A1Q99715 AC025263.3-201ENST00000622965 1396 ntBASIC1.13□□□□□ -2.23
COL12A1Q99715 AL445183.3-201ENST00000414168 502 ntBASIC1.13□□□□□ -2.23
COL12A1Q99715 SNORD121B-201ENST00000458838 81 ntBASIC1.13□□□□□ -2.23
COL12A1Q99715 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.13□□□□□ -2.23
COL12A1Q99715 ZNF734P-201ENST00000419494 1534 ntBASIC1.13□□□□□ -2.23
COL12A1Q99715 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.12□□□□□ -2.23
COL12A1Q99715 AC005912.1-201ENST00000495392 255 ntBASIC1.12□□□□□ -2.23
COL12A1Q99715 MTCYBP37-201ENST00000510642 1133 ntBASIC1.12□□□□□ -2.23
COL12A1Q99715 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.12□□□□□ -2.23
COL12A1Q99715 MTND5P9-201ENST00000503854 1755 ntBASIC1.12□□□□□ -2.23
COL12A1Q99715 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.12□□□□□ -2.23
COL12A1Q99715 RNA5SP309-201ENST00000516670 106 ntBASIC1.12□□□□□ -2.23
COL12A1Q99715 CBX3P2-202ENST00000583365 535 ntBASIC1.12□□□□□ -2.23
COL12A1Q99715 GLUD1P4-201ENST00000590914 418 ntBASIC1.12□□□□□ -2.23
COL12A1Q99715 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
COL12A1Q99715 AC009452.1-201ENST00000640823 606 ntBASIC1.12□□□□□ -2.23
COL12A1Q99715 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
COL12A1Q99715 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
COL12A1Q99715 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.12□□□□□ -2.23
COL12A1Q99715 Y_RNA.60-201ENST00000362831 98 ntBASIC1.12□□□□□ -2.23
COL12A1Q99715 U8.1-201ENST00000362843 134 ntBASIC1.12□□□□□ -2.23
COL12A1Q99715 AC018630.2-202ENST00000422992 927 ntBASIC1.12□□□□□ -2.23
COL12A1Q99715 AC023790.1-201ENST00000482174 347 ntBASIC1.12□□□□□ -2.23
COL12A1Q99715 AC022447.3-201ENST00000506865 495 ntBASIC1.12□□□□□ -2.23
COL12A1Q99715 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.12□□□□□ -2.23
COL12A1Q99715 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.12□□□□□ -2.23
COL12A1Q99715 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
COL12A1Q99715 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.11□□□□□ -2.23
COL12A1Q99715 RNU2-25P-201ENST00000411041 191 ntBASIC1.11□□□□□ -2.23
COL12A1Q99715 AL109741.2-201ENST00000455561 343 ntBASIC1.11□□□□□ -2.23
COL12A1Q99715 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.11□□□□□ -2.23
COL12A1Q99715 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.11□□□□□ -2.23
COL12A1Q99715 MIR3973-201ENST00000579824 107 ntBASIC1.11□□□□□ -2.23
COL12A1Q99715 MTND4LP5-201ENST00000605152 292 ntBASIC1.11□□□□□ -2.23
COL12A1Q99715 AL109933.3-201ENST00000619095 188 ntBASIC1.11□□□□□ -2.23
COL12A1Q99715 AL136164.4-201ENST00000625013 2135 ntBASIC1.11□□□□□ -2.23
COL12A1Q99715 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
COL12A1Q99715 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
COL12A1Q99715 DPPA2P1-201ENST00000428060 556 ntBASIC1.11□□□□□ -2.23
COL12A1Q99715 CBX3P6-201ENST00000430257 527 ntBASIC1.11□□□□□ -2.23
COL12A1Q99715 AC090515.1-201ENST00000465295 476 ntBASIC1.11□□□□□ -2.23
COL12A1Q99715 MIR2909-201ENST00000617113 69 ntBASIC1.11□□□□□ -2.23
COL12A1Q99715 MIR1304-201ENST00000408243 91 ntBASIC1.1□□□□□ -2.23
COL12A1Q99715 TRAV31-201ENST00000502780 342 ntBASIC1.1□□□□□ -2.23
COL12A1Q99715 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC1.1□□□□□ -2.23
COL12A1Q99715 RNU4-60P-201ENST00000517239 135 ntBASIC1.1□□□□□ -2.23
COL12A1Q99715 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.1□□□□□ -2.23
COL12A1Q99715 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
COL12A1Q99715 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
COL12A1Q99715 HSPE1P11-201ENST00000339579 310 ntBASIC1.1□□□□□ -2.23
COL12A1Q99715 RPL23AP35-201ENST00000451906 501 ntBASIC1.1□□□□□ -2.23
COL12A1Q99715 HAUS1P1-201ENST00000505275 832 ntBASIC1.1□□□□□ -2.23
COL12A1Q99715 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC1.1□□□□□ -2.23
COL12A1Q99715 AC016877.3-201ENST00000606778 504 ntBASIC1.1□□□□□ -2.23
COL12A1Q99715 uc_338.20-201ENST00000621563 178 ntBASIC1.1□□□□□ -2.23
COL12A1Q99715 RNU1-148P-201ENST00000384472 162 ntBASIC1.09□□□□□ -2.23
COL12A1Q99715 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.09□□□□□ -2.23
COL12A1Q99715 U73023.1-201ENST00000603134 700 ntBASIC1.09□□□□□ -2.23
COL12A1Q99715 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.09□□□□□ -2.23
COL12A1Q99715 DUXAP9-208ENST00000622815 614 ntBASIC1.09□□□□□ -2.23
COL12A1Q99715 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
COL12A1Q99715 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
COL12A1Q99715 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.23
COL12A1Q99715 SNORA18.2-201ENST00000383865 132 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms