Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 PCAT14-202ENST00000627127 3935 ntBASIC5.25□□□□□ -1.57
SYNGAP1Q96PV0 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 RNU6-61P-201ENST00000365528 109 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 RNU6-890P-201ENST00000384121 107 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 RNU6-432P-201ENST00000384196 109 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 AL391417.1-201ENST00000404100 426 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 AP000580.1-201ENST00000404439 358 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 RNU4-46P-201ENST00000410818 138 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 AC009302.1-201ENST00000417147 390 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 CKS1BP6-201ENST00000424932 240 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 MTND1P17-201ENST00000448961 204 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 SNORD121B-201ENST00000458838 81 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 U8.20-201ENST00000459445 131 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 MTND4LP22-201ENST00000508209 276 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 AC008526.1-201ENST00000509149 338 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 HIGD1AP13-201ENST00000509878 289 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 AC108078.2-201ENST00000510750 236 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 MYL12BP1-201ENST00000569826 507 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 AC023043.2-201ENST00000589678 1026 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 AC008162.1-201ENST00000604718 254 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 AL354984.3-201ENST00000604803 325 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 AL670379.4-201ENST00000605279 254 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 AL008729.2-201ENST00000606393 473 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 KPNA2P1-201ENST00000458289 1591 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 AP000542.2-201ENST00000623199 6179 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 AC027228.2-201ENST00000567141 2154 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 TPTE2P4-201ENST00000258589 1605 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 A2MP1-204ENST00000566278 4130 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 SAMMSON-213ENST00000641336 1521 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 AC025031.4-201ENST00000621248 3271 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 AL592182.3-201ENST00000642132 3304 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 AC104260.2-201ENST00000623551 3497 ntBASIC5.24□□□□□ -1.57
SYNGAP1Q96PV0 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 RNU6-1115P-201ENST00000362490 106 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 RNU5E-6P-201ENST00000365574 115 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 SNORA63.7-201ENST00000365579 123 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 RNU6-784P-201ENST00000384330 106 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 MIR554-201ENST00000384874 96 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 RNU6-516P-201ENST00000411381 104 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 HMGB3P2-201ENST00000411913 584 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 E2F6P2-201ENST00000420708 748 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 DPH3P2-201ENST00000422618 250 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 RPL7P28-201ENST00000437739 740 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 AL162388.1-201ENST00000450912 352 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 AC104472.2-201ENST00000469035 601 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 RN7SL303P-201ENST00000469773 251 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 RN7SL810P-201ENST00000493031 276 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 FTH1P24-201ENST00000503502 462 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 AC097473.1-201ENST00000508142 408 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 MTCO1P24-201ENST00000515438 1558 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 AC107016.1-201ENST00000550463 337 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 OR11H5P-201ENST00000554039 926 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 MIR3138-201ENST00000585238 82 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 NUTF2P8-201ENST00000604593 363 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 AL451044.1-201ENST00000604867 238 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 AL450472.3-201ENST00000615578 367 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 AL445363.3-201ENST00000623080 671 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 AC093775.1-201ENST00000624154 1868 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 AL732372.2-225ENST00000642124 456 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 DHX9P1-201ENST00000436565 3076 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 AC107068.1-201ENST00000563286 4218 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 ZNF734P-201ENST00000419494 1534 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 GABPAP-201ENST00000419271 1356 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms