Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RNU6-27P-201ENST00000516146 107 ntBASIC1.51□□□□□ -2.17
AP1S3Q96PC3 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.51□□□□□ -2.17
AP1S3Q96PC3 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.51□□□□□ -2.17
AP1S3Q96PC3 DEFB108D-201ENST00000527787 222 ntBASIC1.51□□□□□ -2.17
AP1S3Q96PC3 AC010186.2-204ENST00000537668 439 ntBASIC1.51□□□□□ -2.17
AP1S3Q96PC3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.51□□□□□ -2.17
AP1S3Q96PC3 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.51□□□□□ -2.17
AP1S3Q96PC3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.51□□□□□ -2.17
AP1S3Q96PC3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.51□□□□□ -2.17
AP1S3Q96PC3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.51□□□□□ -2.17
AP1S3Q96PC3 LARP7P3-201ENST00000579888 337 ntBASIC1.51□□□□□ -2.17
AP1S3Q96PC3 AC105224.1-201ENST00000587055 421 ntBASIC1.51□□□□□ -2.17
AP1S3Q96PC3 AC007229.1-201ENST00000590455 412 ntBASIC1.51□□□□□ -2.17
AP1S3Q96PC3 AC025165.5-201ENST00000602802 578 ntBASIC1.51□□□□□ -2.17
AP1S3Q96PC3 AC021851.1-201ENST00000608537 1082 ntBASIC1.51□□□□□ -2.17
AP1S3Q96PC3 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
AP1S3Q96PC3 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC1.51□□□□□ -2.17
AP1S3Q96PC3 AP003485.2-201ENST00000623636 610 ntBASIC1.51□□□□□ -2.17
AP1S3Q96PC3 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.51□□□□□ -2.17
AP1S3Q96PC3 ZNF663P-202ENST00000641770 1131 ntBASIC1.51□□□□□ -2.17
AP1S3Q96PC3 NUP58P1-201ENST00000502546 1738 ntBASIC1.51□□□□□ -2.17
AP1S3Q96PC3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.51□□□□□ -2.17
AP1S3Q96PC3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
AP1S3Q96PC3 MIR491-201ENST00000384877 84 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AL035405.1-201ENST00000400795 710 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 BTF3P7-201ENST00000407097 488 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 RNA5SP489-201ENST00000410986 109 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AC092745.2-202ENST00000411880 369 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 Z85995.1-201ENST00000415547 335 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.5□□□□□ -2.17
AP1S3Q96PC3 EIF4EP4-201ENST00000424916 578 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AC124916.1-201ENST00000444020 547 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 HIGD1AP2-201ENST00000446367 280 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AC092685.1-201ENST00000447960 1243 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 TPT1P14-201ENST00000448018 505 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.5□□□□□ -2.17
AP1S3Q96PC3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.5□□□□□ -2.17
AP1S3Q96PC3 RPL23AP3-201ENST00000453844 468 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 MTCO1P42-201ENST00000457379 726 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.5□□□□□ -2.17
AP1S3Q96PC3 RPL23AP42-201ENST00000471152 471 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.5□□□□□ -2.17
AP1S3Q96PC3 RPL7P18-201ENST00000478965 734 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AL359273.1-201ENST00000510918 627 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.5□□□□□ -2.17
AP1S3Q96PC3 HIGD1AP6-201ENST00000521833 279 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 OR5AK1P-201ENST00000524837 922 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AC004217.3-201ENST00000551552 878 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AC024614.2-201ENST00000577584 372 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 MIR5002-201ENST00000584713 97 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AC026790.2-201ENST00000606282 430 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AL137246.1-201ENST00000607072 977 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 STMN1P1-201ENST00000617809 440 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 MIR6873-201ENST00000622788 63 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AC068057.2-201ENST00000624047 895 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AC091925.2-201ENST00000625059 256 ntBASIC1.5□□□□□ -2.17
AP1S3Q96PC3 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
AP1S3Q96PC3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.49□□□□□ -2.17
AP1S3Q96PC3 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.49□□□□□ -2.17
AP1S3Q96PC3 FTLP6-201ENST00000355274 422 ntBASIC1.49□□□□□ -2.17
AP1S3Q96PC3 RNA5SP125-201ENST00000364843 120 ntBASIC1.49□□□□□ -2.17
AP1S3Q96PC3 SNORD82-201ENST00000365530 70 ntBASIC1.49□□□□□ -2.17
AP1S3Q96PC3 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
AP1S3Q96PC3 SNORA36C-201ENST00000384289 132 ntBASIC1.49□□□□□ -2.17
AP1S3Q96PC3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
AP1S3Q96PC3 SNORA48.2-201ENST00000390926 124 ntBASIC1.49□□□□□ -2.17
AP1S3Q96PC3 NPM1P10-201ENST00000398310 865 ntBASIC1.49□□□□□ -2.17
AP1S3Q96PC3 ATP5F1P6-201ENST00000402768 767 ntBASIC1.49□□□□□ -2.17
AP1S3Q96PC3 Z86062.1-201ENST00000406773 777 ntBASIC1.49□□□□□ -2.17
AP1S3Q96PC3 RNA5SP270-201ENST00000411361 118 ntBASIC1.49□□□□□ -2.17
AP1S3Q96PC3 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC1.49□□□□□ -2.17
AP1S3Q96PC3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.49□□□□□ -2.17
AP1S3Q96PC3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.49□□□□□ -2.17
AP1S3Q96PC3 AC093106.2-201ENST00000428212 385 ntBASIC1.49□□□□□ -2.17
AP1S3Q96PC3 RAC1P7-201ENST00000445367 377 ntBASIC1.49□□□□□ -2.17
AP1S3Q96PC3 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.49□□□□□ -2.17
AP1S3Q96PC3 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
AP1S3Q96PC3 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.49□□□□□ -2.17
AP1S3Q96PC3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.49□□□□□ -2.17
AP1S3Q96PC3 RNU5A-7P-201ENST00000515979 116 ntBASIC1.49□□□□□ -2.17
AP1S3Q96PC3 RNU6-1282P-201ENST00000516735 96 ntBASIC1.49□□□□□ -2.17
AP1S3Q96PC3 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.49□□□□□ -2.17
AP1S3Q96PC3 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.49□□□□□ -2.17
AP1S3Q96PC3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.49□□□□□ -2.17
AP1S3Q96PC3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.49□□□□□ -2.17
AP1S3Q96PC3 AC027176.1-201ENST00000560204 514 ntBASIC1.49□□□□□ -2.17
AP1S3Q96PC3 AL049838.1-201ENST00000563647 981 ntBASIC1.49□□□□□ -2.17
AP1S3Q96PC3 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms