Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LRCH3Q96II8 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LRCH3Q96II8 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LRCH3Q96II8 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
LRCH3Q96II8 AL034546.1-201ENST00000623740 3693 ntBASIC6.06□□□□□ -1.44
LRCH3Q96II8 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
LRCH3Q96II8 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LRCH3Q96II8 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LRCH3Q96II8 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
LRCH3Q96II8 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
LRCH3Q96II8 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LRCH3Q96II8 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.05□□□□□ -1.44
LRCH3Q96II8 AC139769.1-204ENST00000472297 1931 ntBASIC6.05□□□□□ -1.44
LRCH3Q96II8 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LRCH3Q96II8 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
LRCH3Q96II8 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LRCH3Q96II8 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LRCH3Q96II8 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
LRCH3Q96II8 MIR133B-201ENST00000362210 119 ntBASIC6.05□□□□□ -1.44
LRCH3Q96II8 RNU4-56P-201ENST00000364700 142 ntBASIC6.05□□□□□ -1.44
LRCH3Q96II8 RNA5SP267-201ENST00000364893 126 ntBASIC6.05□□□□□ -1.44
LRCH3Q96II8 Y_RNA.331-201ENST00000365267 102 ntBASIC6.05□□□□□ -1.44
LRCH3Q96II8 Y_RNA.412-201ENST00000384001 104 ntBASIC6.05□□□□□ -1.44
LRCH3Q96II8 AL357075.1-201ENST00000404107 726 ntBASIC6.05□□□□□ -1.44
LRCH3Q96II8 SNORA11F-201ENST00000408237 128 ntBASIC6.05□□□□□ -1.44
LRCH3Q96II8 COX6B1P1-201ENST00000415962 213 ntBASIC6.05□□□□□ -1.44
LRCH3Q96II8 RPL18P10-201ENST00000425606 538 ntBASIC6.05□□□□□ -1.44
LRCH3Q96II8 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.05□□□□□ -1.44
LRCH3Q96II8 IFNA11P-201ENST00000446352 526 ntBASIC6.05□□□□□ -1.44
LRCH3Q96II8 AL596266.1-201ENST00000448132 400 ntBASIC6.05□□□□□ -1.44
LRCH3Q96II8 RNU6-1211P-201ENST00000459179 105 ntBASIC6.05□□□□□ -1.44
LRCH3Q96II8 AC073901.1-201ENST00000462471 408 ntBASIC6.05□□□□□ -1.44
LRCH3Q96II8 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC6.05□□□□□ -1.44
LRCH3Q96II8 MRPS33P2-201ENST00000507850 322 ntBASIC6.05□□□□□ -1.44
LRCH3Q96II8 HMGB3P3-201ENST00000510526 400 ntBASIC6.05□□□□□ -1.44
LRCH3Q96II8 RNU6-612P-201ENST00000516909 102 ntBASIC6.05□□□□□ -1.44
LRCH3Q96II8 ATP5F1P5-201ENST00000526403 760 ntBASIC6.05□□□□□ -1.44
LRCH3Q96II8 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC6.05□□□□□ -1.44
LRCH3Q96II8 MIR4284-201ENST00000578924 81 ntBASIC6.05□□□□□ -1.44
LRCH3Q96II8 AC069307.1-201ENST00000602820 447 ntBASIC6.05□□□□□ -1.44
LRCH3Q96II8 MIR6130-201ENST00000619419 109 ntBASIC6.05□□□□□ -1.44
LRCH3Q96II8 AC091905.4-201ENST00000623432 202 ntBASIC6.05□□□□□ -1.44
LRCH3Q96II8 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LRCH3Q96II8 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LRCH3Q96II8 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
LRCH3Q96II8 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
LRCH3Q96II8 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LRCH3Q96II8 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LRCH3Q96II8 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.05□□□□□ -1.44
LRCH3Q96II8 MFSD8-219ENST00000641228 2559 ntBASIC6.05□□□□□ -1.44
LRCH3Q96II8 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LRCH3Q96II8 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LRCH3Q96II8 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LRCH3Q96II8 AC027228.2-201ENST00000567141 2154 ntBASIC6.04□□□□□ -1.44
LRCH3Q96II8 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.04□□□□□ -1.44
LRCH3Q96II8 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LRCH3Q96II8 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC6.04□□□□□ -1.44
LRCH3Q96II8 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.04□□□□□ -1.44
LRCH3Q96II8 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.04□□□□□ -1.44
LRCH3Q96II8 RNU1-59P-201ENST00000364829 162 ntBASIC6.04□□□□□ -1.44
LRCH3Q96II8 SNORD56-201ENST00000413522 71 ntBASIC6.04□□□□□ -1.44
LRCH3Q96II8 AC119751.6-201ENST00000416712 186 ntBASIC6.04□□□□□ -1.44
LRCH3Q96II8 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC6.04□□□□□ -1.44
LRCH3Q96II8 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC6.04□□□□□ -1.44
LRCH3Q96II8 MRPS10P1-201ENST00000448483 130 ntBASIC6.04□□□□□ -1.44
LRCH3Q96II8 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC6.04□□□□□ -1.44
LRCH3Q96II8 AC022795.1-201ENST00000473808 480 ntBASIC6.04□□□□□ -1.44
LRCH3Q96II8 RN7SL570P-201ENST00000484405 292 ntBASIC6.04□□□□□ -1.44
LRCH3Q96II8 RN7SKP21-201ENST00000516503 220 ntBASIC6.04□□□□□ -1.44
LRCH3Q96II8 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC6.04□□□□□ -1.44
LRCH3Q96II8 CYCSP26-201ENST00000534107 320 ntBASIC6.04□□□□□ -1.44
LRCH3Q96II8 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.04□□□□□ -1.44
LRCH3Q96II8 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC6.04□□□□□ -1.44
LRCH3Q96II8 AC008749.1-201ENST00000597650 306 ntBASIC6.04□□□□□ -1.44
LRCH3Q96II8 AP000787.2-201ENST00000604432 568 ntBASIC6.04□□□□□ -1.44
LRCH3Q96II8 AL590392.1-201ENST00000604960 446 ntBASIC6.04□□□□□ -1.44
LRCH3Q96II8 SNORD91B-202ENST00000608459 222 ntBASIC6.04□□□□□ -1.44
LRCH3Q96II8 U1.25-201ENST00000614085 162 ntBASIC6.04□□□□□ -1.44
LRCH3Q96II8 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC6.04□□□□□ -1.44
LRCH3Q96II8 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.04□□□□□ -1.44
LRCH3Q96II8 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
LRCH3Q96II8 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.04□□□□□ -1.44
LRCH3Q96II8 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
LRCH3Q96II8 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
LRCH3Q96II8 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.04□□□□□ -1.44
LRCH3Q96II8 AL731532.2-201ENST00000623542 1953 ntBASIC6.04□□□□□ -1.44
LRCH3Q96II8 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.03□□□□□ -1.44
LRCH3Q96II8 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LRCH3Q96II8 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LRCH3Q96II8 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
LRCH3Q96II8 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
LRCH3Q96II8 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
LRCH3Q96II8 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LRCH3Q96II8 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.03□□□□□ -1.44
LRCH3Q96II8 Y_RNA.136-201ENST00000363444 102 ntBASIC6.03□□□□□ -1.44
LRCH3Q96II8 RNA5SP211-201ENST00000365516 117 ntBASIC6.03□□□□□ -1.44
LRCH3Q96II8 RNA5SP30-201ENST00000365552 115 ntBASIC6.03□□□□□ -1.44
LRCH3Q96II8 RNU6-318P-201ENST00000384283 103 ntBASIC6.03□□□□□ -1.44
LRCH3Q96II8 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC6.03□□□□□ -1.44
LRCH3Q96II8 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms