Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.38□□□□□ -2.19
TTC28Q96AY4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC1.38□□□□□ -2.19
TTC28Q96AY4 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
TTC28Q96AY4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
TTC28Q96AY4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.38□□□□□ -2.19
TTC28Q96AY4 RNA5SP331-201ENST00000364986 107 ntBASIC1.38□□□□□ -2.19
TTC28Q96AY4 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
TTC28Q96AY4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.38□□□□□ -2.19
TTC28Q96AY4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.38□□□□□ -2.19
TTC28Q96AY4 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.38□□□□□ -2.19
TTC28Q96AY4 AC008571.1-201ENST00000467232 300 ntBASIC1.38□□□□□ -2.19
TTC28Q96AY4 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC1.38□□□□□ -2.19
TTC28Q96AY4 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.38□□□□□ -2.19
TTC28Q96AY4 RNU6-826P-201ENST00000516827 104 ntBASIC1.38□□□□□ -2.19
TTC28Q96AY4 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.38□□□□□ -2.19
TTC28Q96AY4 AC004241.3-201ENST00000611728 517 ntBASIC1.38□□□□□ -2.19
TTC28Q96AY4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.38□□□□□ -2.19
TTC28Q96AY4 AP000560.1-201ENST00000624150 1937 ntBASIC1.38□□□□□ -2.19
TTC28Q96AY4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
TTC28Q96AY4 AC110792.3-201ENST00000595906 1614 ntBASIC1.37□□□□□ -2.19
TTC28Q96AY4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
TTC28Q96AY4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.37□□□□□ -2.19
TTC28Q96AY4 MIR320A-201ENST00000385302 82 ntBASIC1.37□□□□□ -2.19
TTC28Q96AY4 CCNB2P1-201ENST00000399411 1150 ntBASIC1.37□□□□□ -2.19
TTC28Q96AY4 HMGB3P2-201ENST00000411913 584 ntBASIC1.37□□□□□ -2.19
TTC28Q96AY4 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.37□□□□□ -2.19
TTC28Q96AY4 RPL7P31-201ENST00000450192 724 ntBASIC1.37□□□□□ -2.19
TTC28Q96AY4 CLIC4P1-201ENST00000453177 535 ntBASIC1.37□□□□□ -2.19
TTC28Q96AY4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.37□□□□□ -2.19
TTC28Q96AY4 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.37□□□□□ -2.19
TTC28Q96AY4 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC1.37□□□□□ -2.19
TTC28Q96AY4 AC084757.1-201ENST00000559987 490 ntBASIC1.37□□□□□ -2.19
TTC28Q96AY4 AC073413.2-201ENST00000604332 360 ntBASIC1.37□□□□□ -2.19
TTC28Q96AY4 AK6-205ENST00000618980 483 ntTSL 2 BASIC1.37□□□□□ -2.19
TTC28Q96AY4 TATDN1P1-201ENST00000414123 891 ntBASIC1.37□□□□□ -2.19
TTC28Q96AY4 AL096701.2-201ENST00000416920 238 ntBASIC1.37□□□□□ -2.19
TTC28Q96AY4 AC009965.2-201ENST00000425328 970 ntBASIC1.37□□□□□ -2.19
TTC28Q96AY4 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC1.37□□□□□ -2.19
TTC28Q96AY4 OR4K8P-201ENST00000578842 1048 ntBASIC1.37□□□□□ -2.19
TTC28Q96AY4 CBX3P2-202ENST00000583365 535 ntBASIC1.37□□□□□ -2.19
TTC28Q96AY4 AC005034.5-201ENST00000604219 466 ntBASIC1.37□□□□□ -2.19
TTC28Q96AY4 AC034236.3-201ENST00000605999 461 ntBASIC1.37□□□□□ -2.19
TTC28Q96AY4 AC012213.4-201ENST00000606457 354 ntBASIC1.37□□□□□ -2.19
TTC28Q96AY4 AC019131.2-201ENST00000609071 870 ntBASIC1.37□□□□□ -2.19
TTC28Q96AY4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.36□□□□□ -2.19
TTC28Q96AY4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
TTC28Q96AY4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
TTC28Q96AY4 RAB9AP5-201ENST00000437794 597 ntBASIC1.36□□□□□ -2.19
TTC28Q96AY4 RAB9AP2-201ENST00000443911 597 ntBASIC1.36□□□□□ -2.19
TTC28Q96AY4 BMI1P1-201ENST00000445879 941 ntBASIC1.36□□□□□ -2.19
TTC28Q96AY4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.36□□□□□ -2.19
TTC28Q96AY4 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
TTC28Q96AY4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC1.36□□□□□ -2.19
TTC28Q96AY4 AC010200.2-201ENST00000605098 235 ntBASIC1.36□□□□□ -2.19
TTC28Q96AY4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
TTC28Q96AY4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
TTC28Q96AY4 RNA5SP354-201ENST00000391247 136 ntBASIC1.35□□□□□ -2.19
TTC28Q96AY4 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.35□□□□□ -2.19
TTC28Q96AY4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.35□□□□□ -2.19
TTC28Q96AY4 AL353718.1-201ENST00000451028 517 ntBASIC1.35□□□□□ -2.19
TTC28Q96AY4 OR9N1P-202ENST00000494289 481 ntBASIC1.35□□□□□ -2.19
TTC28Q96AY4 SNORA31.15-201ENST00000516771 132 ntBASIC1.35□□□□□ -2.19
TTC28Q96AY4 FAM106CP-201ENST00000582212 507 ntBASIC1.35□□□□□ -2.19
TTC28Q96AY4 AC015849.6-201ENST00000605454 474 ntBASIC1.35□□□□□ -2.19
TTC28Q96AY4 AL020996.3-201ENST00000606617 222 ntBASIC1.35□□□□□ -2.19
TTC28Q96AY4 AL137847.3-201ENST00000611521 109 ntBASIC1.35□□□□□ -2.19
TTC28Q96AY4 AC048347.1-201ENST00000624621 427 ntBASIC1.35□□□□□ -2.19
TTC28Q96AY4 MTND4P12-201ENST00000498999 1377 ntBASIC1.35□□□□□ -2.19
TTC28Q96AY4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.35□□□□□ -2.19
TTC28Q96AY4 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.35□□□□□ -2.19
TTC28Q96AY4 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
TTC28Q96AY4 HMGB3P30-201ENST00000457863 606 ntBASIC1.35□□□□□ -2.19
TTC28Q96AY4 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.35□□□□□ -2.19
TTC28Q96AY4 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC1.35□□□□□ -2.19
TTC28Q96AY4 MAGOH2P-202ENST00000584384 429 ntBASIC1.35□□□□□ -2.19
TTC28Q96AY4 AC083899.3-201ENST00000603413 594 ntBASIC1.35□□□□□ -2.19
TTC28Q96AY4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.35□□□□□ -2.19
TTC28Q96AY4 CFTRP2-201ENST00000634304 199 ntBASIC1.35□□□□□ -2.19
TTC28Q96AY4 AC123912.3-201ENST00000600907 1367 ntBASIC1.35□□□□□ -2.19
TTC28Q96AY4 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC1.34□□□□□ -2.19
TTC28Q96AY4 RNU6-1218P-201ENST00000458990 108 ntBASIC1.34□□□□□ -2.19
TTC28Q96AY4 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.34□□□□□ -2.19
TTC28Q96AY4 SNX5P1-201ENST00000505757 1041 ntBASIC1.34□□□□□ -2.19
TTC28Q96AY4 AC093752.1-206ENST00000511823 336 ntBASIC1.34□□□□□ -2.19
TTC28Q96AY4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.34□□□□□ -2.19
TTC28Q96AY4 AP003033.1-201ENST00000527244 415 ntBASIC1.34□□□□□ -2.19
TTC28Q96AY4 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.34□□□□□ -2.19
TTC28Q96AY4 AC233266.2-201ENST00000567067 528 ntBASIC1.34□□□□□ -2.19
TTC28Q96AY4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.34□□□□□ -2.19
TTC28Q96AY4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.34□□□□□ -2.19
TTC28Q96AY4 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC1.34□□□□□ -2.19
TTC28Q96AY4 C2orf27A-204ENST00000623058 969 ntBASIC1.34□□□□□ -2.19
TTC28Q96AY4 MIR338-201ENST00000636369 67 ntBASIC1.34□□□□□ -2.19
TTC28Q96AY4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
TTC28Q96AY4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.34□□□□□ -2.19
TTC28Q96AY4 RNU6-1331P-201ENST00000363658 106 ntBASIC1.34□□□□□ -2.2
TTC28Q96AY4 RNU6-603P-201ENST00000411403 107 ntBASIC1.34□□□□□ -2.2
TTC28Q96AY4 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC1.34□□□□□ -2.2
TTC28Q96AY4 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC1.34□□□□□ -2.2
TTC28Q96AY4 AC069277.2-201ENST00000454211 432 ntBASIC1.34□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms