Protein–RNA interactions for Protein: Q96A33

CCDC47, Coiled-coil domain-containing protein 47, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47Q96A33 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.17□□□□□ -1.9
CCDC47Q96A33 HMGN2P35-201ENST00000412164 270 ntBASIC3.17□□□□□ -1.9
CCDC47Q96A33 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.17□□□□□ -1.9
CCDC47Q96A33 AL953862.1-201ENST00000423016 168 ntBASIC3.17□□□□□ -1.9
CCDC47Q96A33 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC47Q96A33 AL358075.3-201ENST00000426289 226 ntBASIC3.17□□□□□ -1.9
CCDC47Q96A33 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CCDC47Q96A33 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CCDC47Q96A33 MEMO1P3-201ENST00000459811 302 ntBASIC3.17□□□□□ -1.9
CCDC47Q96A33 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC47Q96A33 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.17□□□□□ -1.9
CCDC47Q96A33 AC021451.1-201ENST00000523498 1129 ntBASIC3.17□□□□□ -1.9
CCDC47Q96A33 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC47Q96A33 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CCDC47Q96A33 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.17□□□□□ -1.9
CCDC47Q96A33 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC47Q96A33 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC47Q96A33 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC47Q96A33 MIR3605-201ENST00000583214 100 ntBASIC3.17□□□□□ -1.9
CCDC47Q96A33 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC47Q96A33 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC47Q96A33 DUXAP3-201ENST00000603616 594 ntBASIC3.17□□□□□ -1.9
CCDC47Q96A33 AC069431.2-201ENST00000604149 1099 ntBASIC3.17□□□□□ -1.9
CCDC47Q96A33 AF129408.1-201ENST00000608767 431 ntBASIC3.17□□□□□ -1.9
CCDC47Q96A33 AC034102.8-201ENST00000615146 484 ntBASIC3.17□□□□□ -1.9
CCDC47Q96A33 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC47Q96A33 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CCDC47Q96A33 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CCDC47Q96A33 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.16□□□□□ -1.9
CCDC47Q96A33 RNA5SP171-201ENST00000391071 115 ntBASIC3.16□□□□□ -1.9
CCDC47Q96A33 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC47Q96A33 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC47Q96A33 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC47Q96A33 AL513043.1-201ENST00000439124 535 ntBASIC3.16□□□□□ -1.9
CCDC47Q96A33 Z82210.1-201ENST00000440037 231 ntBASIC3.16□□□□□ -1.9
CCDC47Q96A33 MTCYBP3-201ENST00000445588 1137 ntBASIC3.16□□□□□ -1.9
CCDC47Q96A33 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC47Q96A33 AC104563.1-201ENST00000476147 376 ntBASIC3.16□□□□□ -1.9
CCDC47Q96A33 HMGB1P36-201ENST00000487709 576 ntBASIC3.16□□□□□ -1.9
CCDC47Q96A33 RPS15AP34-201ENST00000487776 387 ntBASIC3.16□□□□□ -1.9
CCDC47Q96A33 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC47Q96A33 AC117522.3-201ENST00000507974 584 ntBASIC3.16□□□□□ -1.9
CCDC47Q96A33 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC47Q96A33 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.16□□□□□ -1.9
CCDC47Q96A33 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC47Q96A33 AC005498.1-201ENST00000592125 465 ntBASIC3.16□□□□□ -1.9
CCDC47Q96A33 AC023043.3-201ENST00000593113 385 ntBASIC3.16□□□□□ -1.9
CCDC47Q96A33 AC245517.5-201ENST00000611529 162 ntBASIC3.16□□□□□ -1.9
CCDC47Q96A33 AL162274.2-201ENST00000614406 332 ntBASIC3.16□□□□□ -1.9
CCDC47Q96A33 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC47Q96A33 AC116618.1-201ENST00000634617 774 ntBASIC3.16□□□□□ -1.9
CCDC47Q96A33 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.15□□□□□ -1.9
CCDC47Q96A33 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC47Q96A33 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC47Q96A33 AC022336.2-201ENST00000568966 2538 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 AC092593.1-201ENST00000515413 1815 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 RNU6-621P-201ENST00000364752 109 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 SNORA23-201ENST00000365128 182 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 RNU6-741P-201ENST00000383889 107 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 RNU1-39P-201ENST00000383897 165 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 RNU6-114P-201ENST00000384704 105 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 AL389915.1-201ENST00000422463 466 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 AC007919.1-201ENST00000429380 217 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 EEF1A1P39-201ENST00000440791 250 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 AL049734.2-201ENST00000441066 616 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 BNIP3P2-201ENST00000441221 577 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC47Q96A33 WASF1P1-201ENST00000447560 1131 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 RPS15AP27-201ENST00000449183 343 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC47Q96A33 RPS20P20-201ENST00000460498 340 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC47Q96A33 CDC42P4-201ENST00000510507 563 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 AC079395.1-201ENST00000510981 262 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.15□□□□□ -1.91
CCDC47Q96A33 AC109445.1-201ENST00000512356 383 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 SCARNA13-201ENST00000516672 275 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC47Q96A33 TRAV28-201ENST00000557548 323 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 ZNF861P-201ENST00000588126 639 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 NRBF2P5-201ENST00000603087 788 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 AC024220.1-201ENST00000603675 484 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC47Q96A33 MIR92B-201ENST00000607575 96 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 AC013476.2-201ENST00000614456 459 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 AL355493.4-201ENST00000618530 292 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 AC109809.1-201ENST00000619665 545 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.15□□□□□ -1.91
CCDC47Q96A33 AP003399.1-201ENST00000637534 361 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC47Q96A33 AC011477.1-204ENST00000623416 1325 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 DDX10P1-201ENST00000448545 1933 ntBASIC3.15□□□□□ -1.91
CCDC47Q96A33 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC47Q96A33 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC47Q96A33 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC47Q96A33 RNU6-289P-201ENST00000364093 107 ntBASIC3.14□□□□□ -1.91
CCDC47Q96A33 RNU1-140P-201ENST00000365040 165 ntBASIC3.14□□□□□ -1.91
CCDC47Q96A33 MIR181B1-201ENST00000385240 110 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms