Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RN7SL860P-201ENST00000473738 223 ntBASIC4.61□□□□□ -1.67
ERCC4Q92889 AC126389.1-201ENST00000477436 290 ntBASIC4.61□□□□□ -1.67
ERCC4Q92889 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ERCC4Q92889 NIPA2P2-201ENST00000496376 1083 ntBASIC4.61□□□□□ -1.67
ERCC4Q92889 EIF4EP3-201ENST00000498782 656 ntBASIC4.61□□□□□ -1.67
ERCC4Q92889 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.61□□□□□ -1.67
ERCC4Q92889 RNU7-143P-201ENST00000516781 65 ntBASIC4.61□□□□□ -1.67
ERCC4Q92889 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.61□□□□□ -1.67
ERCC4Q92889 AC023050.3-201ENST00000541142 333 ntBASIC4.61□□□□□ -1.67
ERCC4Q92889 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.61□□□□□ -1.67
ERCC4Q92889 TVP23BP1-201ENST00000557500 617 ntBASIC4.61□□□□□ -1.67
ERCC4Q92889 OR4K8P-201ENST00000578842 1048 ntBASIC4.61□□□□□ -1.67
ERCC4Q92889 AC244100.1-202ENST00000621554 382 ntBASIC4.61□□□□□ -1.67
ERCC4Q92889 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.61□□□□□ -1.67
ERCC4Q92889 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.61□□□□□ -1.67
ERCC4Q92889 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.61□□□□□ -1.67
ERCC4Q92889 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
ERCC4Q92889 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ERCC4Q92889 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ERCC4Q92889 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.61□□□□□ -1.67
ERCC4Q92889 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
ERCC4Q92889 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ERCC4Q92889 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ERCC4Q92889 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ERCC4Q92889 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.6□□□□□ -1.67
ERCC4Q92889 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
ERCC4Q92889 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.6□□□□□ -1.67
ERCC4Q92889 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
ERCC4Q92889 RNU6-1078P-201ENST00000364522 103 ntBASIC4.6□□□□□ -1.67
ERCC4Q92889 AL356432.1-201ENST00000405809 419 ntBASIC4.6□□□□□ -1.67
ERCC4Q92889 RNU6-1148P-201ENST00000410992 104 ntBASIC4.6□□□□□ -1.67
ERCC4Q92889 OR1AA1P-201ENST00000419597 916 ntBASIC4.6□□□□□ -1.67
ERCC4Q92889 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ERCC4Q92889 C4BPAP2-201ENST00000428434 478 ntBASIC4.6□□□□□ -1.67
ERCC4Q92889 MTATP6P16-201ENST00000434543 526 ntBASIC4.6□□□□□ -1.67
ERCC4Q92889 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.6□□□□□ -1.67
ERCC4Q92889 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.6□□□□□ -1.67
ERCC4Q92889 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.6□□□□□ -1.67
ERCC4Q92889 AC093840.1-201ENST00000511599 336 ntBASIC4.6□□□□□ -1.67
ERCC4Q92889 AC114797.1-201ENST00000514003 728 ntBASIC4.6□□□□□ -1.67
ERCC4Q92889 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.6□□□□□ -1.67
ERCC4Q92889 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.6□□□□□ -1.67
ERCC4Q92889 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ERCC4Q92889 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.6□□□□□ -1.67
ERCC4Q92889 AP005435.4-201ENST00000529514 284 ntBASIC4.6□□□□□ -1.67
ERCC4Q92889 AL133271.1-201ENST00000538229 291 ntBASIC4.6□□□□□ -1.67
ERCC4Q92889 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.6□□□□□ -1.67
ERCC4Q92889 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.6□□□□□ -1.67
ERCC4Q92889 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ERCC4Q92889 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.6□□□□□ -1.67
ERCC4Q92889 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.6□□□□□ -1.67
ERCC4Q92889 AL132765.2-201ENST00000610812 351 ntBASIC4.6□□□□□ -1.67
ERCC4Q92889 FAM27D1-201ENST00000612308 341 ntBASIC4.6□□□□□ -1.67
ERCC4Q92889 MIR6810-201ENST00000622701 70 ntBASIC4.6□□□□□ -1.67
ERCC4Q92889 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.6□□□□□ -1.67
ERCC4Q92889 MTND1P37-201ENST00000636562 264 ntBASIC4.6□□□□□ -1.67
ERCC4Q92889 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.6□□□□□ -1.67
ERCC4Q92889 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.6□□□□□ -1.67
ERCC4Q92889 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.6□□□□□ -1.67
ERCC4Q92889 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.6□□□□□ -1.67
ERCC4Q92889 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.6□□□□□ -1.67
ERCC4Q92889 OR4G1P-203ENST00000641984 1631 ntBASIC4.6□□□□□ -1.67
ERCC4Q92889 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.6□□□□□ -1.67
ERCC4Q92889 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ERCC4Q92889 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.59□□□□□ -1.67
ERCC4Q92889 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ERCC4Q92889 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.59□□□□□ -1.67
ERCC4Q92889 U3.15-201ENST00000365398 212 ntBASIC4.59□□□□□ -1.67
ERCC4Q92889 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
ERCC4Q92889 RNU1-89P-201ENST00000384592 164 ntBASIC4.59□□□□□ -1.67
ERCC4Q92889 MIR124-3-201ENST00000384866 87 ntBASIC4.59□□□□□ -1.67
ERCC4Q92889 MIR514A2-201ENST00000385131 88 ntBASIC4.59□□□□□ -1.67
ERCC4Q92889 MIR514A3-201ENST00000385132 88 ntBASIC4.59□□□□□ -1.67
ERCC4Q92889 RNU6-821P-201ENST00000390995 107 ntBASIC4.59□□□□□ -1.67
ERCC4Q92889 RNU6-754P-201ENST00000391166 107 ntBASIC4.59□□□□□ -1.67
ERCC4Q92889 RNU6-332P-201ENST00000391193 108 ntBASIC4.59□□□□□ -1.67
ERCC4Q92889 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ERCC4Q92889 AL162578.1-201ENST00000406202 378 ntBASIC4.59□□□□□ -1.67
ERCC4Q92889 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ERCC4Q92889 RAB28P1-201ENST00000411517 641 ntBASIC4.59□□□□□ -1.67
ERCC4Q92889 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.59□□□□□ -1.67
ERCC4Q92889 AL159169.1-201ENST00000421119 127 ntBASIC4.59□□□□□ -1.67
ERCC4Q92889 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.59□□□□□ -1.67
ERCC4Q92889 AC009963.2-201ENST00000453431 138 ntBASIC4.59□□□□□ -1.67
ERCC4Q92889 HMGN2P26-201ENST00000463169 339 ntBASIC4.59□□□□□ -1.67
ERCC4Q92889 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ERCC4Q92889 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ERCC4Q92889 MTCO3P9-201ENST00000506989 781 ntBASIC4.59□□□□□ -1.67
ERCC4Q92889 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.59□□□□□ -1.67
ERCC4Q92889 RNU2-10P-201ENST00000516375 211 ntBASIC4.59□□□□□ -1.67
ERCC4Q92889 RN7SKP219-201ENST00000516825 296 ntBASIC4.59□□□□□ -1.67
ERCC4Q92889 RNU6-798P-201ENST00000516912 103 ntBASIC4.59□□□□□ -1.67
ERCC4Q92889 PSMA2P1-201ENST00000526365 646 ntBASIC4.59□□□□□ -1.67
ERCC4Q92889 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.59□□□□□ -1.67
ERCC4Q92889 OR5AL2P-201ENST00000532185 920 ntBASIC4.59□□□□□ -1.67
ERCC4Q92889 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ERCC4Q92889 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.59□□□□□ -1.67
ERCC4Q92889 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.59□□□□□ -1.67
ERCC4Q92889 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.59□□□□□ -1.67
ERCC4Q92889 AL157700.1-201ENST00000561973 1432 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms