Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.77□□□□□ -1.65
DDX1Q92499 SCARNA24.1-201ENST00000516465 137 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 RNU6-1137P-201ENST00000517073 99 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 AC022634.1-201ENST00000520765 532 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 COPS8P3-201ENST00000526024 482 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.77□□□□□ -1.65
DDX1Q92499 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.77□□□□□ -1.65
DDX1Q92499 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.77□□□□□ -1.65
DDX1Q92499 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.77□□□□□ -1.65
DDX1Q92499 GLUD1P4-201ENST00000590914 418 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 AC080078.3-201ENST00000605407 463 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 HMGN2P28-201ENST00000606102 262 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 AC093913.1-201ENST00000614178 329 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 AL354950.2-201ENST00000617939 290 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 AP005019.3-201ENST00000620418 560 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 AL136964.1-201ENST00000622038 2990 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 uc_338.22-201ENST00000622722 187 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 AL136313.1-201ENST00000624804 202 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
DDX1Q92499 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
DDX1Q92499 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.77□□□□□ -1.65
DDX1Q92499 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.77□□□□□ -1.65
DDX1Q92499 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.77□□□□□ -1.65
DDX1Q92499 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
DDX1Q92499 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
DDX1Q92499 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
DDX1Q92499 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
DDX1Q92499 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
DDX1Q92499 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
DDX1Q92499 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
DDX1Q92499 MFSD8-242ENST00000641690 4199 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
DDX1Q92499 NACAP2-201ENST00000318548 624 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.76□□□□□ -1.65
DDX1Q92499 RNA5SP307-201ENST00000362863 116 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 RNU6-525P-201ENST00000363685 104 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 Y_RNA.197-201ENST00000364004 102 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 Y_RNA.301-201ENST00000364990 103 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.76□□□□□ -1.65
DDX1Q92499 RNU6-1297P-201ENST00000384415 104 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 SNORA11.2-201ENST00000408318 127 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 MIR548F4-201ENST00000408515 105 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 RNU2-9P-201ENST00000410194 145 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 Y_RNA.615-201ENST00000410769 117 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 RNU4-14P-201ENST00000410858 122 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
DDX1Q92499 UBE2FP1-201ENST00000416536 447 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 AC114482.1-201ENST00000418010 247 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 AL139095.3-201ENST00000419672 1203 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 MTCYBP9-201ENST00000431021 303 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.76□□□□□ -1.65
DDX1Q92499 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.76□□□□□ -1.65
DDX1Q92499 AC016696.1-201ENST00000446949 318 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 RN7SL303P-201ENST00000469773 251 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.76□□□□□ -1.65
DDX1Q92499 AC105417.1-201ENST00000514691 285 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 RNU7-51P-201ENST00000516560 62 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 RNU6-64P-201ENST00000517119 105 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
DDX1Q92499 BNIP3P6-201ENST00000549284 499 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 AC063950.1-201ENST00000552036 308 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.76□□□□□ -1.65
DDX1Q92499 RPL23AP97-201ENST00000568955 471 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 AL034351.1-201ENST00000605288 668 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.76□□□□□ -1.65
DDX1Q92499 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.76□□□□□ -1.65
DDX1Q92499 AC084781.2-201ENST00000615568 161 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
DDX1Q92499 AC091925.1-201ENST00000623204 462 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
DDX1Q92499 MAPK10-286ENST00000641208 8747 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
DDX1Q92499 MAPK10-303ENST00000641324 3959 ntBASIC4.76□□□□□ -1.65
DDX1Q92499 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
DDX1Q92499 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
DDX1Q92499 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.75□□□□□ -1.65
DDX1Q92499 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
DDX1Q92499 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
DDX1Q92499 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.75□□□□□ -1.65
DDX1Q92499 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.75□□□□□ -1.65
DDX1Q92499 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
DDX1Q92499 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
DDX1Q92499 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.75□□□□□ -1.65
DDX1Q92499 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.75□□□□□ -1.65
DDX1Q92499 AC073343.1-201ENST00000328239 651 ntBASIC4.75□□□□□ -1.65
DDX1Q92499 HSPE1P11-201ENST00000339579 310 ntBASIC4.75□□□□□ -1.65
DDX1Q92499 SNORA62.3-201ENST00000365110 153 ntBASIC4.75□□□□□ -1.65
DDX1Q92499 RNU1-44P-201ENST00000384453 163 ntBASIC4.75□□□□□ -1.65
DDX1Q92499 MIR514A2-201ENST00000385131 88 ntBASIC4.75□□□□□ -1.65
DDX1Q92499 MIR514A3-201ENST00000385132 88 ntBASIC4.75□□□□□ -1.65
DDX1Q92499 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
DDX1Q92499 RNY4P36-201ENST00000391116 96 ntBASIC4.75□□□□□ -1.65
DDX1Q92499 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.75□□□□□ -1.65
DDX1Q92499 AL591416.1-201ENST00000404015 867 ntBASIC4.75□□□□□ -1.65
DDX1Q92499 AL359634.1-202ENST00000404721 284 ntBASIC4.75□□□□□ -1.65
DDX1Q92499 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.75□□□□□ -1.65
DDX1Q92499 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.75□□□□□ -1.65
DDX1Q92499 AL451054.2-201ENST00000420896 202 ntBASIC4.75□□□□□ -1.65
DDX1Q92499 HSPE1P1-201ENST00000421494 318 ntBASIC4.75□□□□□ -1.65
DDX1Q92499 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms