Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 RNU1-132P-201ENST00000364300 164 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 Y_RNA.255-201ENST00000364581 97 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 RNU6-996P-201ENST00000365438 107 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 SNORA62-201ENST00000365493 153 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 MIR454-201ENST00000390180 115 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 AL136116.1-201ENST00000403591 381 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 AL591416.1-201ENST00000404015 867 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 RNU6-1068P-201ENST00000410958 103 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 C4BPAP2-201ENST00000428434 478 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 MTATP6P16-201ENST00000434543 526 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 RPS23P7-201ENST00000466210 444 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 GMFBP1-201ENST00000467831 427 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 UQCRHP4-201ENST00000471686 272 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 AC008958.1-201ENST00000511047 682 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 AC105417.1-201ENST00000514691 285 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 SNORD60.2-201ENST00000516883 86 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 HMGB1P41-201ENST00000520234 440 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 HMGN1P28-201ENST00000521340 364 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 AC100870.1-201ENST00000522035 505 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 FAM60DP-201ENST00000524174 632 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 TRAV8-5-201ENST00000537369 341 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 AC015917.1-201ENST00000579654 510 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 BNIP3P10-201ENST00000605360 577 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 U7.8-201ENST00000619968 63 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 AL445363.3-201ENST00000623080 671 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 AC006065.5-201ENST00000623427 349 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 AL773545.4-201ENST00000637262 310 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 AL513478.4-201ENST00000641636 310 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 MTND5P3-201ENST00000438536 1800 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 AL354685.2-201ENST00000448218 1447 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 AC073544.1-201ENST00000600110 1595 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 Z82217.1-201ENST00000625157 8149 ntBASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 NCAPGP1-201ENST00000505112 1814 ntBASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 MIR383-201ENST00000362257 73 ntBASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 RNU5E-6P-201ENST00000365574 115 ntBASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 AL136372.1-201ENST00000403060 228 ntBASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 RNU2-36P-201ENST00000410361 191 ntBASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 RNU4-65P-201ENST00000410473 140 ntBASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 SDCBPP3-201ENST00000419629 891 ntBASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 AC245054.1-201ENST00000420944 258 ntBASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 MTND3P23-201ENST00000431980 347 ntBASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 RPL36AP53-201ENST00000432891 316 ntBASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 AC234775.1-201ENST00000454247 670 ntBASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 PMCHL2-203ENST00000457791 237 ntBASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 SNORD108-201ENST00000459332 71 ntBASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 AC078785.3-201ENST00000476607 425 ntBASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 AL163973.1-201ENST00000484753 577 ntBASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 AC091167.1-201ENST00000492017 396 ntBASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 RPS15AP36-201ENST00000492022 382 ntBASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 RNA5SP519-201ENST00000516480 119 ntBASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 GNRHR2P1-201ENST00000555315 631 ntBASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 AC023575.1-201ENST00000580510 358 ntBASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 ARF4P1-201ENST00000605447 541 ntBASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 Y_RNA.804-201ENST00000615262 101 ntBASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 AC093648.1-201ENST00000623546 606 ntBASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 MIR3653-201ENST00000625572 110 ntBASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCHCR1Q8TD31 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 MTND5P17-201ENST00000418405 1603 ntBASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 Y_RNA.157-201ENST00000363638 102 ntBASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 RNU6-1284P-201ENST00000363701 100 ntBASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 AL583835.1-201ENST00000399570 407 ntBASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 RNU2-39P-201ENST00000410604 198 ntBASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 RNU6-373P-201ENST00000411247 98 ntBASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 AC087650.1-201ENST00000431445 468 ntBASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms