Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RNF169Q8NCN4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF169Q8NCN4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.32□□□□□ -1.72
RNF169Q8NCN4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF169Q8NCN4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF169Q8NCN4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF169Q8NCN4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF169Q8NCN4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF169Q8NCN4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF169Q8NCN4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF169Q8NCN4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF169Q8NCN4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
RNF169Q8NCN4 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RNF169Q8NCN4 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RNF169Q8NCN4 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.32□□□□□ -1.72
RNF169Q8NCN4 RNA5SP97-201ENST00000365006 84 ntBASIC4.32□□□□□ -1.72
RNF169Q8NCN4 Y_RNA.356-201ENST00000365475 113 ntBASIC4.32□□□□□ -1.72
RNF169Q8NCN4 RNU6-116P-201ENST00000384042 109 ntBASIC4.32□□□□□ -1.72
RNF169Q8NCN4 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF169Q8NCN4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF169Q8NCN4 RPL30P3-201ENST00000424262 333 ntBASIC4.32□□□□□ -1.72
RNF169Q8NCN4 SRIP2-201ENST00000428470 166 ntBASIC4.32□□□□□ -1.72
RNF169Q8NCN4 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF169Q8NCN4 HLA-N-201ENST00000437516 135 ntBASIC4.32□□□□□ -1.72
RNF169Q8NCN4 BNIP3P2-201ENST00000441221 577 ntBASIC4.32□□□□□ -1.72
RNF169Q8NCN4 CBWD4P-201ENST00000445695 655 ntBASIC4.32□□□□□ -1.72
RNF169Q8NCN4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF169Q8NCN4 AC140076.1-201ENST00000449897 361 ntBASIC4.32□□□□□ -1.72
RNF169Q8NCN4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.32□□□□□ -1.72
RNF169Q8NCN4 COX7A2P2-201ENST00000505291 250 ntBASIC4.32□□□□□ -1.72
RNF169Q8NCN4 MTCO3P9-201ENST00000506989 781 ntBASIC4.32□□□□□ -1.72
RNF169Q8NCN4 RNA5SP401-201ENST00000515920 127 ntBASIC4.32□□□□□ -1.72
RNF169Q8NCN4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF169Q8NCN4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF169Q8NCN4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF169Q8NCN4 MIR4444-1-201ENST00000581696 74 ntBASIC4.32□□□□□ -1.72
RNF169Q8NCN4 MIR4444-2-201ENST00000584390 74 ntBASIC4.32□□□□□ -1.72
RNF169Q8NCN4 VN1R80P-201ENST00000597126 338 ntBASIC4.32□□□□□ -1.72
RNF169Q8NCN4 AC103710.2-201ENST00000609912 942 ntBASIC4.32□□□□□ -1.72
RNF169Q8NCN4 AC245517.5-201ENST00000611529 162 ntBASIC4.32□□□□□ -1.72
RNF169Q8NCN4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF169Q8NCN4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF169Q8NCN4 AC002550.2-201ENST00000621246 394 ntBASIC4.32□□□□□ -1.72
RNF169Q8NCN4 AC012442.3-202ENST00000636742 206 ntBASIC4.32□□□□□ -1.72
RNF169Q8NCN4 AC006026.1-201ENST00000444025 1803 ntBASIC4.32□□□□□ -1.72
RNF169Q8NCN4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
RNF169Q8NCN4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF169Q8NCN4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF169Q8NCN4 RIOK3P1-201ENST00000418778 1528 ntBASIC4.31□□□□□ -1.72
RNF169Q8NCN4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
RNF169Q8NCN4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF169Q8NCN4 OR1S2-201ENST00000302592 978 ntBASIC4.31□□□□□ -1.72
RNF169Q8NCN4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF169Q8NCN4 Y_RNA.22-201ENST00000362492 102 ntBASIC4.31□□□□□ -1.72
RNF169Q8NCN4 SNORA71.3-201ENST00000362582 128 ntBASIC4.31□□□□□ -1.72
RNF169Q8NCN4 RNU6-223P-201ENST00000362830 107 ntBASIC4.31□□□□□ -1.72
RNF169Q8NCN4 RNA5SP399-201ENST00000364003 117 ntBASIC4.31□□□□□ -1.72
RNF169Q8NCN4 SNORD74.4-201ENST00000364129 80 ntBASIC4.31□□□□□ -1.72
RNF169Q8NCN4 Y_RNA.255-201ENST00000364581 97 ntBASIC4.31□□□□□ -1.72
RNF169Q8NCN4 SNORD81.2-201ENST00000365153 76 ntBASIC4.31□□□□□ -1.72
RNF169Q8NCN4 Y_RNA.367-201ENST00000365544 101 ntBASIC4.31□□□□□ -1.72
RNF169Q8NCN4 MTCO3P46-201ENST00000425787 232 ntBASIC4.31□□□□□ -1.72
RNF169Q8NCN4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.31□□□□□ -1.72
RNF169Q8NCN4 TAAR7P-201ENST00000436141 242 ntBASIC4.31□□□□□ -1.72
RNF169Q8NCN4 AL353748.1-201ENST00000440753 474 ntBASIC4.31□□□□□ -1.72
RNF169Q8NCN4 AL451050.1-201ENST00000450126 415 ntBASIC4.31□□□□□ -1.72
RNF169Q8NCN4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF169Q8NCN4 AC108059.3-201ENST00000456388 214 ntBASIC4.31□□□□□ -1.72
RNF169Q8NCN4 AC020893.1-201ENST00000502452 580 ntBASIC4.31□□□□□ -1.72
RNF169Q8NCN4 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF169Q8NCN4 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF169Q8NCN4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF169Q8NCN4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF169Q8NCN4 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF169Q8NCN4 CYCSP30-201ENST00000546447 172 ntBASIC4.31□□□□□ -1.72
RNF169Q8NCN4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.31□□□□□ -1.72
RNF169Q8NCN4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.31□□□□□ -1.72
RNF169Q8NCN4 AC244100.1-202ENST00000621554 382 ntBASIC4.31□□□□□ -1.72
RNF169Q8NCN4 AC112204.3-201ENST00000623822 332 ntBASIC4.31□□□□□ -1.72
RNF169Q8NCN4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF169Q8NCN4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF169Q8NCN4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF169Q8NCN4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF169Q8NCN4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.31□□□□□ -1.72
RNF169Q8NCN4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.31□□□□□ -1.72
RNF169Q8NCN4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
RNF169Q8NCN4 AL359893.1-201ENST00000447628 1580 ntBASIC4.31□□□□□ -1.72
RNF169Q8NCN4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.31□□□□□ -1.72
RNF169Q8NCN4 AC022893.2-201ENST00000564832 3296 ntBASIC4.31□□□□□ -1.72
RNF169Q8NCN4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RNF169Q8NCN4 ZNF734P-201ENST00000419494 1534 ntBASIC4.31□□□□□ -1.72
RNF169Q8NCN4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF169Q8NCN4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF169Q8NCN4 AL157700.1-201ENST00000561973 1432 ntBASIC4.3□□□□□ -1.72
RNF169Q8NCN4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF169Q8NCN4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF169Q8NCN4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF169Q8NCN4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
RNF169Q8NCN4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF169Q8NCN4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms