Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AC022483.1-201ENST00000514020 567 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 RNU1-95P-201ENST00000516357 160 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 RNU1-128P-201ENST00000516704 160 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 RNU6-759P-201ENST00000516740 103 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AC087276.1-201ENST00000529659 480 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AC013828.2-201ENST00000532487 235 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AC136618.2-201ENST00000575091 400 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AC138761.3-201ENST00000579993 334 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 MIR2682-201ENST00000580305 110 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AC090616.2-202ENST00000584248 222 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AL353997.4-201ENST00000586196 166 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 GLUD1P4-201ENST00000590914 418 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AC012119.1-201ENST00000603184 222 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AC107214.2-201ENST00000608204 634 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 Z99129.2-201ENST00000619967 314 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AL161637.1-201ENST00000622380 412 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AC092192.1-201ENST00000633154 1018 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AL161912.2-201ENST00000565707 3007 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 DEFB108F-201ENST00000344638 222 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 RNU1-39P-201ENST00000383897 165 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 SNORA5A-201ENST00000384111 134 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 Y_RNA.560-201ENST00000384689 102 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 MIR1193-201ENST00000408109 78 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 MTCO1P17-201ENST00000411522 491 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 HMGN1P24-201ENST00000412282 298 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 USP9YP26-201ENST00000421008 661 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 AL645937.1-202ENST00000421799 937 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 TMEM167AP1-201ENST00000423409 219 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 RPL27AP8-201ENST00000424277 446 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 AL831737.1-201ENST00000441288 271 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 AC112653.1-201ENST00000443851 386 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 AP000542.1-201ENST00000448473 371 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 SNORD121B-201ENST00000458838 81 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 BZW1P2-201ENST00000473537 826 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 RPL23AP11-201ENST00000475260 469 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 RPL32P34-201ENST00000486380 400 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 AC110794.1-201ENST00000505816 425 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 AL359273.1-201ENST00000510918 627 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 RNU6-798P-201ENST00000516912 103 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 AC026241.1-201ENST00000517873 2142 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 TRMT10BP1-201ENST00000519377 943 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 CASP1P1-201ENST00000526345 212 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 DEFB108D-201ENST00000527787 222 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 AL133271.1-201ENST00000538229 291 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 AC007954.1-201ENST00000554198 494 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 GTF2IP22-201ENST00000554443 182 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 AL357094.1-201ENST00000603845 844 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 AP000254.1-201ENST00000609934 520 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 AL603758.1-201ENST00000618654 241 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 AL356266.1-201ENST00000623311 483 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 AC034229.5-201ENST00000624258 185 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 AC244258.1-201ENST00000637553 1071 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 AC099063.3-201ENST00000642066 185 ntBASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CCDC71LQ8N9Z2 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 ZNF285B-201ENST00000561698 1767 ntBASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 OR4G2P-202ENST00000641004 1759 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms