Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.32□□□□□ -1.88
CPSF7Q8N684 SNORA70.18-201ENST00000516696 98 ntBASIC3.32□□□□□ -1.88
CPSF7Q8N684 RNU6-798P-201ENST00000516912 103 ntBASIC3.32□□□□□ -1.88
CPSF7Q8N684 AC022878.1-201ENST00000530684 149 ntBASIC3.32□□□□□ -1.88
CPSF7Q8N684 AC135279.1-201ENST00000543493 504 ntBASIC3.32□□□□□ -1.88
CPSF7Q8N684 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.32□□□□□ -1.88
CPSF7Q8N684 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.32□□□□□ -1.88
CPSF7Q8N684 AC006362.1-201ENST00000567392 174 ntBASIC3.32□□□□□ -1.88
CPSF7Q8N684 AP001429.1-201ENST00000602568 530 ntBASIC3.32□□□□□ -1.88
CPSF7Q8N684 AL022099.1-201ENST00000604551 712 ntBASIC3.32□□□□□ -1.88
CPSF7Q8N684 AC064872.1-201ENST00000604823 1072 ntBASIC3.32□□□□□ -1.88
CPSF7Q8N684 AC087752.4-201ENST00000605911 462 ntBASIC3.32□□□□□ -1.88
CPSF7Q8N684 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.32□□□□□ -1.88
CPSF7Q8N684 AL442067.2-201ENST00000614033 363 ntBASIC3.32□□□□□ -1.88
CPSF7Q8N684 AC012150.2-201ENST00000621300 544 ntBASIC3.32□□□□□ -1.88
CPSF7Q8N684 AC112204.3-201ENST00000623822 332 ntBASIC3.32□□□□□ -1.88
CPSF7Q8N684 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.32□□□□□ -1.88
CPSF7Q8N684 AC004972.1-201ENST00000623934 2209 ntBASIC3.32□□□□□ -1.88
CPSF7Q8N684 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CPSF7Q8N684 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CPSF7Q8N684 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
CPSF7Q8N684 RPL7P26-201ENST00000333817 754 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CPSF7Q8N684 SNORA31-201ENST00000362607 130 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 Y_RNA.436-201ENST00000384097 102 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 RNU6-882P-201ENST00000391025 103 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 RNU2-43P-201ENST00000410306 190 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 RNU2-37P-201ENST00000410695 177 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 RPL21P32-201ENST00000419877 477 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 MTCO2P34-201ENST00000421994 607 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 AC233728.2-201ENST00000425348 757 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 RPL21P66-201ENST00000426566 466 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.31□□□□□ -1.88
CPSF7Q8N684 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.31□□□□□ -1.88
CPSF7Q8N684 AC092641.1-201ENST00000440229 772 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 USP9YP29-201ENST00000445112 563 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.31□□□□□ -1.88
CPSF7Q8N684 AL592447.1-201ENST00000447592 540 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.31□□□□□ -1.88
CPSF7Q8N684 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.31□□□□□ -1.88
CPSF7Q8N684 RPL31P13-201ENST00000484151 370 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 RNU2-58P-201ENST00000516403 183 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.31□□□□□ -1.88
CPSF7Q8N684 AC024909.2-201ENST00000553035 286 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 FAM60BP-201ENST00000578364 658 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.31□□□□□ -1.88
CPSF7Q8N684 BNIP3P8-201ENST00000597863 560 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 AC068790.3-201ENST00000602988 553 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 AL359999.1-201ENST00000604513 294 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.31□□□□□ -1.88
CPSF7Q8N684 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.31□□□□□ -1.88
CPSF7Q8N684 AC107294.3-201ENST00000609211 526 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 AC138749.5-201ENST00000611461 208 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 AC116165.2-201ENST00000616705 206 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 AC009159.1-201ENST00000618386 642 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 AC009268.2-201ENST00000621925 457 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.31□□□□□ -1.88
CPSF7Q8N684 AC244258.1-201ENST00000637553 1071 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 AC010149.2-201ENST00000637608 315 ntBASIC3.31□□□□□ -1.88
CPSF7Q8N684 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CPSF7Q8N684 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CPSF7Q8N684 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CPSF7Q8N684 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.31□□□□□ -1.88
CPSF7Q8N684 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CPSF7Q8N684 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 GABPAP-201ENST00000419271 1356 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 SNORA51.2-201ENST00000364595 132 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 RNU6-637P-201ENST00000384050 107 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 RNVU1-14-201ENST00000384770 164 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 MIR490-201ENST00000384865 128 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 SNORD115.1-201ENST00000391109 76 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 RNU6-516P-201ENST00000411381 104 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 HMGN1P14-201ENST00000412459 517 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 USP9YP13-201ENST00000417797 480 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 MORF4L1P6-201ENST00000418771 268 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 CYCSP4-201ENST00000429682 331 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 VN1R108P-201ENST00000431580 830 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 AL353706.1-201ENST00000436728 494 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 AL138799.3-201ENST00000438968 350 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 TPT1P14-201ENST00000448018 505 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 SSXP1-201ENST00000453640 473 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 MTCO2P18-201ENST00000457151 658 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 snoU13.4-201ENST00000458916 104 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 RPL23AP41-201ENST00000484754 458 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 RPL32P34-201ENST00000486380 400 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 AC055855.1-201ENST00000489563 579 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 AC026801.2-201ENST00000515352 425 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 RNU6-201P-201ENST00000517100 61 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 SCARNA20.6-201ENST00000517251 106 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms