Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 Y_RNA.27-201ENST00000362540 103 ntBASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 Y_RNA.117-201ENST00000363294 101 ntBASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 MIR548H3-201ENST00000408771 118 ntBASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 RNU2-33P-201ENST00000410344 192 ntBASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 CHEK2P5-201ENST00000423877 246 ntBASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 RPL7L1P9-201ENST00000431298 745 ntBASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 LINC02210-201ENST00000444561 288 ntBASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 FTLP8-201ENST00000446770 267 ntBASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 AC005077.1-201ENST00000449226 375 ntBASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 AC004129.2-201ENST00000457229 287 ntBASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 RPL12P20-201ENST00000475538 479 ntBASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 AC025458.1-201ENST00000506046 166 ntBASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 IGKV2D-23-201ENST00000518179 286 ntBASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 NDUFB4P11-201ENST00000560510 395 ntBASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 COX6CP7-201ENST00000597056 208 ntBASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 AC008121.1-201ENST00000603244 268 ntBASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 AL731566.2-201ENST00000618971 317 ntBASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 AP000560.1-201ENST00000624150 1937 ntBASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 Z73965.1-201ENST00000623412 2297 ntBASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 Y_RNA.20-201ENST00000362479 113 ntBASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 SNORD50.1-201ENST00000362987 71 ntBASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 MIR34A-201ENST00000385130 110 ntBASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 SNORA40C-201ENST00000391285 128 ntBASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 HSPA8P15-201ENST00000401676 786 ntBASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 AL358472.1-201ENST00000431295 329 ntBASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 AC023141.3-201ENST00000436698 278 ntBASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 HIGD1AP2-201ENST00000446367 280 ntBASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 AL356981.1-201ENST00000454879 684 ntBASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 HMGB1P22-201ENST00000505315 124 ntBASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 OR51K1P-201ENST00000510214 950 ntBASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 AC074250.1-201ENST00000511117 192 ntBASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 RN7SKP276-201ENST00000516242 268 ntBASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 Y_RNA.700-201ENST00000516806 100 ntBASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 AL590705.4-201ENST00000532209 134 ntBASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 MED28P6-201ENST00000558776 231 ntBASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 AL139395.1-201ENST00000603662 160 ntBASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
DEPDC4Q8N2C3 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 Z75746.1-201ENST00000440243 2080 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 SMG1P4-204ENST00000523028 4131 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 RNU6-200P-201ENST00000364743 107 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 RNU6-1062P-201ENST00000383908 107 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 MIR130B-202ENST00000385018 82 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 SNORA17A-201ENST00000391185 133 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 DUTP5-201ENST00000406790 469 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 180.2 ms