Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.88□□□□□ -1.79
HERC6Q8IVU3 TPTE2P5-203ENST00000458118 728 ntBASIC3.88□□□□□ -1.79
HERC6Q8IVU3 RN7SL93P-201ENST00000463035 293 ntBASIC3.88□□□□□ -1.79
HERC6Q8IVU3 UBE2DNL-203ENST00000474922 222 ntBASIC3.88□□□□□ -1.79
HERC6Q8IVU3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.88□□□□□ -1.79
HERC6Q8IVU3 AC114967.1-201ENST00000504890 259 ntBASIC3.88□□□□□ -1.79
HERC6Q8IVU3 RNU1-61P-201ENST00000516107 151 ntBASIC3.88□□□□□ -1.79
HERC6Q8IVU3 SUMO2P20-201ENST00000520803 283 ntBASIC3.88□□□□□ -1.79
HERC6Q8IVU3 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.88□□□□□ -1.79
HERC6Q8IVU3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.88□□□□□ -1.79
HERC6Q8IVU3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.88□□□□□ -1.79
HERC6Q8IVU3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.88□□□□□ -1.79
HERC6Q8IVU3 AC009977.1-201ENST00000586015 570 ntBASIC3.88□□□□□ -1.79
HERC6Q8IVU3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.88□□□□□ -1.79
HERC6Q8IVU3 CKS1BP3-201ENST00000600888 237 ntBASIC3.88□□□□□ -1.79
HERC6Q8IVU3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.88□□□□□ -1.79
HERC6Q8IVU3 AP001506.1-201ENST00000615444 211 ntBASIC3.88□□□□□ -1.79
HERC6Q8IVU3 AL603839.4-201ENST00000624658 1005 ntBASIC3.88□□□□□ -1.79
HERC6Q8IVU3 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.88□□□□□ -1.79
HERC6Q8IVU3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
HERC6Q8IVU3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HERC6Q8IVU3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HERC6Q8IVU3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
HERC6Q8IVU3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.88□□□□□ -1.79
HERC6Q8IVU3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.87□□□□□ -1.79
HERC6Q8IVU3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HERC6Q8IVU3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HERC6Q8IVU3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HERC6Q8IVU3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HERC6Q8IVU3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HERC6Q8IVU3 Y_RNA.51-201ENST00000362725 102 ntBASIC3.87□□□□□ -1.79
HERC6Q8IVU3 RNU1-18P-201ENST00000363062 164 ntBASIC3.87□□□□□ -1.79
HERC6Q8IVU3 SNORA23-201ENST00000365128 182 ntBASIC3.87□□□□□ -1.79
HERC6Q8IVU3 HMGN2P8-201ENST00000391458 268 ntBASIC3.87□□□□□ -1.79
HERC6Q8IVU3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HERC6Q8IVU3 RPS3AP3-201ENST00000411933 242 ntBASIC3.87□□□□□ -1.79
HERC6Q8IVU3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.87□□□□□ -1.79
HERC6Q8IVU3 AL356867.1-201ENST00000429623 299 ntBASIC3.87□□□□□ -1.79
HERC6Q8IVU3 AC010153.1-201ENST00000432862 727 ntBASIC3.87□□□□□ -1.79
HERC6Q8IVU3 TIMM9P1-201ENST00000436122 256 ntBASIC3.87□□□□□ -1.79
HERC6Q8IVU3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HERC6Q8IVU3 RPL26P6-201ENST00000440913 438 ntBASIC3.87□□□□□ -1.79
HERC6Q8IVU3 FTH1P25-201ENST00000447665 469 ntBASIC3.87□□□□□ -1.79
HERC6Q8IVU3 MTND2P24-201ENST00000453434 806 ntBASIC3.87□□□□□ -1.79
HERC6Q8IVU3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.87□□□□□ -1.79
HERC6Q8IVU3 CFTRP1-201ENST00000456646 183 ntBASIC3.87□□□□□ -1.79
HERC6Q8IVU3 RPL12P22-201ENST00000519073 490 ntBASIC3.87□□□□□ -1.79
HERC6Q8IVU3 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.87□□□□□ -1.79
HERC6Q8IVU3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.87□□□□□ -1.79
HERC6Q8IVU3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.87□□□□□ -1.79
HERC6Q8IVU3 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.87□□□□□ -1.79
HERC6Q8IVU3 AC006362.1-201ENST00000567392 174 ntBASIC3.87□□□□□ -1.79
HERC6Q8IVU3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.87□□□□□ -1.79
HERC6Q8IVU3 MIR4325-201ENST00000583049 90 ntBASIC3.87□□□□□ -1.79
HERC6Q8IVU3 AC105224.1-201ENST00000587055 421 ntBASIC3.87□□□□□ -1.79
HERC6Q8IVU3 AF038458.1-201ENST00000588406 262 ntBASIC3.87□□□□□ -1.79
HERC6Q8IVU3 AC245517.5-201ENST00000611529 162 ntBASIC3.87□□□□□ -1.79
HERC6Q8IVU3 AC011939.3-201ENST00000613686 466 ntBASIC3.87□□□□□ -1.79
HERC6Q8IVU3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.87□□□□□ -1.79
HERC6Q8IVU3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HERC6Q8IVU3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HERC6Q8IVU3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 BX323014.1-201ENST00000412876 237 ntBASIC3.86□□□□□ -1.79
HERC6Q8IVU3 BTF3L4P1-201ENST00000413813 468 ntBASIC3.86□□□□□ -1.79
HERC6Q8IVU3 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 MTCO2P34-201ENST00000421994 607 ntBASIC3.86□□□□□ -1.79
HERC6Q8IVU3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 AC008850.1-201ENST00000427546 362 ntBASIC3.86□□□□□ -1.79
HERC6Q8IVU3 AC119618.1-201ENST00000434191 222 ntBASIC3.86□□□□□ -1.79
HERC6Q8IVU3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 MTCO2P18-201ENST00000457151 658 ntBASIC3.86□□□□□ -1.79
HERC6Q8IVU3 HSPE1P6-201ENST00000479457 291 ntBASIC3.86□□□□□ -1.79
HERC6Q8IVU3 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 ARL2BPP4-201ENST00000506854 471 ntBASIC3.86□□□□□ -1.79
HERC6Q8IVU3 CDC42P4-201ENST00000510507 563 ntBASIC3.86□□□□□ -1.79
HERC6Q8IVU3 PHBP14-201ENST00000512887 367 ntBASIC3.86□□□□□ -1.79
HERC6Q8IVU3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 Y_RNA.672-201ENST00000516289 104 ntBASIC3.86□□□□□ -1.79
HERC6Q8IVU3 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 AC008489.1-201ENST00000524271 483 ntBASIC3.86□□□□□ -1.79
HERC6Q8IVU3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 OR4H12P-201ENST00000556269 907 ntBASIC3.86□□□□□ -1.79
HERC6Q8IVU3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 AP005205.1-201ENST00000563503 508 ntBASIC3.86□□□□□ -1.79
HERC6Q8IVU3 AC099489.2-201ENST00000574976 260 ntBASIC3.86□□□□□ -1.79
HERC6Q8IVU3 BDH2P1-201ENST00000602288 736 ntBASIC3.86□□□□□ -1.79
HERC6Q8IVU3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 AC131902.3-201ENST00000611767 581 ntBASIC3.86□□□□□ -1.79
HERC6Q8IVU3 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms