Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC012005.1-201ENST00000624575 75 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 AC006927.3-201ENST00000638789 384 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 MTND5P19-201ENST00000424872 1794 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC71Q8IV32 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 MIR135A2-201ENST00000384854 100 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 MIR887-201ENST00000401258 79 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 AL031577.2-201ENST00000404133 280 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 AL354719.1-201ENST00000406535 843 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 RN7SKP123-201ENST00000410732 291 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 RNU2-71P-201ENST00000411395 189 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 AL445669.1-201ENST00000426743 755 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 RPL21P40-201ENST00000428586 483 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 AL445567.1-201ENST00000439121 144 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 AC108734.1-201ENST00000439549 399 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 RPS12P18-201ENST00000442381 270 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 UQCRHP3-201ENST00000451503 251 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 MTND1P9-201ENST00000453775 944 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 snoU13.4-201ENST00000458916 104 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 VN1R17P-201ENST00000472048 1090 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 RPS3AP43-201ENST00000479743 781 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 AC021382.1-201ENST00000483523 359 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 OR2A20P-203ENST00000498397 1268 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 AC111000.2-201ENST00000507775 550 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 KLHL2P1-201ENST00000508691 521 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 AP003497.1-201ENST00000528472 562 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 MIR544B-201ENST00000582372 78 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 MTCYBP22-201ENST00000603788 447 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 BCRP9-201ENST00000605312 388 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 AC106028.5-201ENST00000610332 395 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 ZNF807-201ENST00000328088 1707 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 AC093010.3-201ENST00000570269 15214 ntBASIC2.95□□□□□ -1.94
CCDC71Q8IV32 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.95□□□□□ -1.94
CCDC71Q8IV32 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC71Q8IV32 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC71Q8IV32 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CCDC71Q8IV32 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC71Q8IV32 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC71Q8IV32 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC71Q8IV32 FRG1BP-201ENST00000278882 761 ntBASIC2.94□□□□□ -1.94
CCDC71Q8IV32 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC71Q8IV32 RNU6-660P-201ENST00000364566 109 ntBASIC2.94□□□□□ -1.94
CCDC71Q8IV32 RNU6-769P-201ENST00000384407 104 ntBASIC2.94□□□□□ -1.94
CCDC71Q8IV32 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC71Q8IV32 AC245054.2-201ENST00000415639 319 ntBASIC2.94□□□□□ -1.94
CCDC71Q8IV32 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC71Q8IV32 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC71Q8IV32 Z99497.1-201ENST00000421282 135 ntBASIC2.94□□□□□ -1.94
CCDC71Q8IV32 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC71Q8IV32 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC71Q8IV32 AL121871.1-201ENST00000443413 436 ntBASIC2.94□□□□□ -1.94
CCDC71Q8IV32 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC71Q8IV32 SSXP4-201ENST00000451349 245 ntBASIC2.94□□□□□ -1.94
CCDC71Q8IV32 AC006445.1-201ENST00000491925 405 ntBASIC2.94□□□□□ -1.94
CCDC71Q8IV32 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC71Q8IV32 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC71Q8IV32 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC71Q8IV32 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC71Q8IV32 RNU6-528P-201ENST00000516926 100 ntBASIC2.94□□□□□ -1.94
CCDC71Q8IV32 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC71Q8IV32 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC71Q8IV32 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC71Q8IV32 HIGD1AP1-201ENST00000550979 275 ntBASIC2.94□□□□□ -1.94
CCDC71Q8IV32 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.94□□□□□ -1.94
CCDC71Q8IV32 SETP2-201ENST00000553886 926 ntBASIC2.94□□□□□ -1.94
CCDC71Q8IV32 EIF4BP1-201ENST00000554881 351 ntBASIC2.94□□□□□ -1.94
CCDC71Q8IV32 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC71Q8IV32 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC71Q8IV32 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC71Q8IV32 OR4K8P-201ENST00000578842 1048 ntBASIC2.94□□□□□ -1.94
CCDC71Q8IV32 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC71Q8IV32 BNIP3P23-201ENST00000599655 511 ntBASIC2.94□□□□□ -1.94
CCDC71Q8IV32 AC107214.2-201ENST00000608204 634 ntBASIC2.94□□□□□ -1.94
CCDC71Q8IV32 AL355810.1-201ENST00000614629 552 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms