Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RNU2-15P-201ENST00000410692 191 ntBASIC4.56□□□□□ -1.68
ATG4DQ86TL0 AC093162.1-201ENST00000419682 124 ntBASIC4.56□□□□□ -1.68
ATG4DQ86TL0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ATG4DQ86TL0 IGHV5-78-201ENST00000450948 295 ntBASIC4.56□□□□□ -1.68
ATG4DQ86TL0 AL356981.1-201ENST00000454879 684 ntBASIC4.56□□□□□ -1.68
ATG4DQ86TL0 snoU13.20-201ENST00000459180 104 ntBASIC4.56□□□□□ -1.68
ATG4DQ86TL0 RNU7-120P-201ENST00000459334 63 ntBASIC4.56□□□□□ -1.68
ATG4DQ86TL0 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.56□□□□□ -1.68
ATG4DQ86TL0 RNU6-1278P-201ENST00000516130 107 ntBASIC4.56□□□□□ -1.68
ATG4DQ86TL0 RN7SKP66-201ENST00000516681 231 ntBASIC4.56□□□□□ -1.68
ATG4DQ86TL0 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.56□□□□□ -1.68
ATG4DQ86TL0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.56□□□□□ -1.68
ATG4DQ86TL0 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.56□□□□□ -1.68
ATG4DQ86TL0 CBX3P4-201ENST00000538909 354 ntBASIC4.56□□□□□ -1.68
ATG4DQ86TL0 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.56□□□□□ -1.68
ATG4DQ86TL0 AC009852.2-201ENST00000567898 485 ntBASIC4.56□□□□□ -1.68
ATG4DQ86TL0 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.56□□□□□ -1.68
ATG4DQ86TL0 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.56□□□□□ -1.68
ATG4DQ86TL0 AC105254.2-201ENST00000603636 436 ntBASIC4.56□□□□□ -1.68
ATG4DQ86TL0 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.56□□□□□ -1.68
ATG4DQ86TL0 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ATG4DQ86TL0 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
ATG4DQ86TL0 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ATG4DQ86TL0 HSPA8P4-201ENST00000511877 1920 ntBASIC4.56□□□□□ -1.68
ATG4DQ86TL0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ATG4DQ86TL0 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATG4DQ86TL0 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATG4DQ86TL0 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATG4DQ86TL0 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.55□□□□□ -1.68
ATG4DQ86TL0 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATG4DQ86TL0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.55□□□□□ -1.68
ATG4DQ86TL0 SNURFL-201ENST00000309296 343 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 RNU6-1266P-201ENST00000362794 105 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 Y_RNA.122-201ENST00000363331 96 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 RNU6-1078P-201ENST00000364522 103 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.55□□□□□ -1.68
ATG4DQ86TL0 RNU6-1293P-201ENST00000384077 107 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 MIR585-201ENST00000384887 94 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 AL645733.1-201ENST00000402250 217 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 RNU6-174P-201ENST00000410406 106 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 RPL21P24-201ENST00000413752 448 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 COX6CP10-201ENST00000416832 224 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.55□□□□□ -1.68
ATG4DQ86TL0 RPL23AP38-201ENST00000423801 469 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 AC096920.1-201ENST00000423991 241 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 UBE2V1P4-201ENST00000425374 344 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 AC234779.1-201ENST00000425910 285 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.55□□□□□ -1.68
ATG4DQ86TL0 RPEP5-201ENST00000441137 268 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.55□□□□□ -1.68
ATG4DQ86TL0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.55□□□□□ -1.68
ATG4DQ86TL0 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.55□□□□□ -1.68
ATG4DQ86TL0 AP000926.1-201ENST00000479573 241 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 RPL21P103-201ENST00000479921 488 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.55□□□□□ -1.68
ATG4DQ86TL0 AC004980.4-201ENST00000513375 203 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 AC104057.1-201ENST00000515547 497 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 RN7SKP82-201ENST00000516786 223 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 CDH12P4-201ENST00000517835 295 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 CDH12P3-201ENST00000517935 295 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 CDH12P1-201ENST00000518435 295 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 IGKV2-23-201ENST00000518729 323 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 AC034114.1-201ENST00000520293 285 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 AP002392.1-201ENST00000537692 208 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.55□□□□□ -1.68
ATG4DQ86TL0 AC092490.3-201ENST00000545370 572 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 AC063949.1-201ENST00000552900 865 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.55□□□□□ -1.68
ATG4DQ86TL0 BX284668.6-201ENST00000606899 438 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 AL355816.1-201ENST00000607951 118 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 AC006023.2-201ENST00000609916 167 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 RNU6-156P-201ENST00000621869 107 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 AP002799.1-201ENST00000623552 423 ntBASIC4.55□□□□□ -1.68
ATG4DQ86TL0 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.55□□□□□ -1.68
ATG4DQ86TL0 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.55□□□□□ -1.68
ATG4DQ86TL0 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATG4DQ86TL0 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
ATG4DQ86TL0 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATG4DQ86TL0 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.55□□□□□ -1.68
ATG4DQ86TL0 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
ATG4DQ86TL0 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.55□□□□□ -1.68
ATG4DQ86TL0 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
ATG4DQ86TL0 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATG4DQ86TL0 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.54□□□□□ -1.68
ATG4DQ86TL0 IRF5P1-201ENST00000504852 2164 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 AC008079.2-201ENST00000623543 20396 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
ATG4DQ86TL0 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.54□□□□□ -1.68
ATG4DQ86TL0 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATG4DQ86TL0 RN7SKP104-201ENST00000362605 328 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 RNA5SP305-201ENST00000362665 119 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 snoU2_19.2-201ENST00000363024 80 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 SNORA73.1-201ENST00000363107 205 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 RNU6-682P-201ENST00000363843 106 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 RNU6-704P-201ENST00000364162 103 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 RNU6-1303P-201ENST00000364841 107 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
ATG4DQ86TL0 SNORA70.10-201ENST00000384515 134 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 SNORA66-201ENST00000384792 133 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 MIR613-201ENST00000385248 95 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms