Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AC010928.2-201ENST00000588017 287 ntBASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 MIR6078-201ENST00000611069 100 ntBASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 AL359851.1-201ENST00000569460 4997 ntBASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 PABPC1P7-201ENST00000413177 1513 ntBASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 MIR222-201ENST00000384992 110 ntBASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 AC234781.2-201ENST00000426370 994 ntBASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 RNU1-104P-201ENST00000517280 175 ntBASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 RPS15AP11-201ENST00000594193 385 ntBASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 Y_RNA.393-201ENST00000383936 102 ntBASIC0.84□□□□□ -2.27
VPS13BQ7Z7G8 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC0.84□□□□□ -2.27
VPS13BQ7Z7G8 HMGN1P33-201ENST00000432945 451 ntBASIC0.84□□□□□ -2.27
VPS13BQ7Z7G8 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.84□□□□□ -2.27
VPS13BQ7Z7G8 AC239860.2-201ENST00000525886 270 ntBASIC0.84□□□□□ -2.27
VPS13BQ7Z7G8 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC0.84□□□□□ -2.27
VPS13BQ7Z7G8 MIR3935-201ENST00000583472 104 ntBASIC0.84□□□□□ -2.27
VPS13BQ7Z7G8 AC097504.2-201ENST00000608088 454 ntBASIC0.84□□□□□ -2.27
VPS13BQ7Z7G8 AL592494.3-201ENST00000609485 464 ntBASIC0.84□□□□□ -2.27
VPS13BQ7Z7G8 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC0.84□□□□□ -2.27
VPS13BQ7Z7G8 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.84□□□□□ -2.27
VPS13BQ7Z7G8 AL157700.1-201ENST00000561973 1432 ntBASIC0.84□□□□□ -2.27
VPS13BQ7Z7G8 AC011477.1-204ENST00000623416 1325 ntBASIC0.84□□□□□ -2.27
VPS13BQ7Z7G8 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC0.84□□□□□ -2.27
VPS13BQ7Z7G8 MTND4P34-201ENST00000572715 1371 ntBASIC0.84□□□□□ -2.27
VPS13BQ7Z7G8 RNU6-799P-201ENST00000363567 107 ntBASIC0.84□□□□□ -2.28
VPS13BQ7Z7G8 SLC9B1P2-201ENST00000398120 1184 ntBASIC0.84□□□□□ -2.28
VPS13BQ7Z7G8 FABP5P3-201ENST00000437960 408 ntBASIC0.84□□□□□ -2.28
VPS13BQ7Z7G8 LSM1P1-201ENST00000438629 273 ntBASIC0.84□□□□□ -2.28
VPS13BQ7Z7G8 SSXP4-201ENST00000451349 245 ntBASIC0.84□□□□□ -2.28
VPS13BQ7Z7G8 RGS5-217ENST00000451759 835 ntTSL 3 BASIC0.84□□□□□ -2.28
VPS13BQ7Z7G8 AC104472.2-201ENST00000469035 601 ntBASIC0.84□□□□□ -2.28
VPS13BQ7Z7G8 AC068135.2-201ENST00000569293 1028 ntBASIC0.84□□□□□ -2.28
VPS13BQ7Z7G8 AC112191.3-201ENST00000604371 277 ntBASIC0.84□□□□□ -2.28
VPS13BQ7Z7G8 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC0.84□□□□□ -2.28
VPS13BQ7Z7G8 MTCO1P48-201ENST00000448024 1096 ntBASIC0.84□□□□□ -2.28
VPS13BQ7Z7G8 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC0.84□□□□□ -2.28
VPS13BQ7Z7G8 SNORD59.2-201ENST00000516873 68 ntBASIC0.84□□□□□ -2.28
VPS13BQ7Z7G8 RNU6-56P-201ENST00000516986 93 ntBASIC0.84□□□□□ -2.28
VPS13BQ7Z7G8 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC0.84□□□□□ -2.28
VPS13BQ7Z7G8 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC0.84□□□□□ -2.28
VPS13BQ7Z7G8 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC0.84□□□□□ -2.28
VPS13BQ7Z7G8 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC0.84□□□□□ -2.28
VPS13BQ7Z7G8 SUB1P4-201ENST00000566062 339 ntBASIC0.84□□□□□ -2.28
VPS13BQ7Z7G8 AC105245.1-201ENST00000581934 244 ntBASIC0.84□□□□□ -2.28
VPS13BQ7Z7G8 RNA5SP108-201ENST00000605921 117 ntBASIC0.84□□□□□ -2.28
VPS13BQ7Z7G8 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.28
VPS13BQ7Z7G8 AC009541.1-201ENST00000438279 2662 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 RNU6-225P-201ENST00000384613 103 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 MIR625-201ENST00000385047 85 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 RPS3AP44-201ENST00000425466 790 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 HMGB1P45-201ENST00000435986 653 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 NBEAP1-201ENST00000554452 979 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 AC010735.1-201ENST00000567305 1026 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 AC111188.2-201ENST00000529697 1387 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 RNU1-109P-201ENST00000383960 147 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 AL357078.2-201ENST00000416486 427 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 AC114973.1-201ENST00000429057 632 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 RAB9AP5-201ENST00000437794 597 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 RAB9AP2-201ENST00000443911 597 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 RPPH1-2P-201ENST00000516688 293 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 AL589935.2-201ENST00000616471 1231 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 uc_338.20-201ENST00000621563 178 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 PABPC1P9-201ENST00000426076 1612 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 RNA5SP393-201ENST00000363423 117 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 BX682237.1-201ENST00000415016 335 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 MTCO1P43-201ENST00000431831 488 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 MTND2P2-201ENST00000434633 945 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 IFNA20P-201ENST00000436840 528 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 THAP5P1-201ENST00000439089 262 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 PGBD4P3-201ENST00000440731 581 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 AC108059.3-201ENST00000456388 214 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 COX6CP14-201ENST00000469580 174 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 AC084364.2-201ENST00000546924 395 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 SNHG22-203ENST00000617833 660 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 SGO1P2-201ENST00000429458 1589 ntBASIC0.83□□□□□ -2.28
VPS13BQ7Z7G8 HSPE1P1-201ENST00000421494 318 ntBASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 BTF3P12-201ENST00000519620 469 ntBASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 AC123786.2-201ENST00000603459 275 ntBASIC0.82□□□□□ -2.28
VPS13BQ7Z7G8 AC025016.1-201ENST00000616746 682 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms