Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 SNORA31.26-201ENST00000517250 137 ntBASIC1.01□□□□□ -2.25
VPS13CQ709C8 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.01□□□□□ -2.25
VPS13CQ709C8 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
VPS13CQ709C8 AC013553.2-201ENST00000604244 589 ntBASIC1.01□□□□□ -2.25
VPS13CQ709C8 U3.40-201ENST00000408706 208 ntBASIC1□□□□□ -2.25
VPS13CQ709C8 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1□□□□□ -2.25
VPS13CQ709C8 AC025755.1-201ENST00000521306 278 ntBASIC1□□□□□ -2.25
VPS13CQ709C8 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1□□□□□ -2.25
VPS13CQ709C8 MKKS-204ENST00000639674 192 ntBASIC1□□□□□ -2.25
VPS13CQ709C8 Y_RNA.85-201ENST00000363014 111 ntBASIC1□□□□□ -2.25
VPS13CQ709C8 CR848007.2-201ENST00000424918 787 ntBASIC1□□□□□ -2.25
VPS13CQ709C8 CBX3P6-201ENST00000430257 527 ntBASIC1□□□□□ -2.25
VPS13CQ709C8 OR51B8P-201ENST00000449892 769 ntBASIC1□□□□□ -2.25
VPS13CQ709C8 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC1□□□□□ -2.25
VPS13CQ709C8 VN1R79P-201ENST00000593540 513 ntBASIC1□□□□□ -2.25
VPS13CQ709C8 AC241377.1-201ENST00000619797 406 ntBASIC1□□□□□ -2.25
VPS13CQ709C8 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1□□□□□ -2.25
VPS13CQ709C8 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1□□□□□ -2.25
VPS13CQ709C8 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1□□□□□ -2.25
VPS13CQ709C8 NPM1P52-201ENST00000518264 846 ntBASIC1□□□□□ -2.25
VPS13CQ709C8 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1□□□□□ -2.25
VPS13CQ709C8 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC1□□□□□ -2.25
VPS13CQ709C8 MIR2909-201ENST00000617113 69 ntBASIC1□□□□□ -2.25
VPS13CQ709C8 uc_338.20-201ENST00000621563 178 ntBASIC1□□□□□ -2.25
VPS13CQ709C8 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
VPS13CQ709C8 AC007098.1-201ENST00000420122 367 ntBASIC0.99□□□□□ -2.25
VPS13CQ709C8 AC107015.1-201ENST00000466902 747 ntBASIC0.99□□□□□ -2.25
VPS13CQ709C8 AC096571.1-202ENST00000506634 735 ntBASIC0.99□□□□□ -2.25
VPS13CQ709C8 AC118942.1-201ENST00000529674 1035 ntBASIC0.99□□□□□ -2.25
VPS13CQ709C8 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC0.99□□□□□ -2.25
VPS13CQ709C8 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
VPS13CQ709C8 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC0.99□□□□□ -2.25
VPS13CQ709C8 MTND5P9-201ENST00000503854 1755 ntBASIC0.99□□□□□ -2.25
VPS13CQ709C8 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.99□□□□□ -2.25
VPS13CQ709C8 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC0.99□□□□□ -2.25
VPS13CQ709C8 MOB4-205ENST00000409916 829 ntTSL 3 BASIC0.99□□□□□ -2.25
VPS13CQ709C8 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC0.99□□□□□ -2.25
VPS13CQ709C8 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC0.99□□□□□ -2.25
VPS13CQ709C8 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.99□□□□□ -2.25
VPS13CQ709C8 AP002907.1-201ENST00000606361 1430 ntBASIC0.99□□□□□ -2.25
VPS13CQ709C8 AC135776.4-201ENST00000624300 1904 ntBASIC0.98□□□□□ -2.25
VPS13CQ709C8 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
VPS13CQ709C8 AL445183.3-201ENST00000414168 502 ntBASIC0.98□□□□□ -2.25
VPS13CQ709C8 AC004941.2-201ENST00000427009 228 ntBASIC0.98□□□□□ -2.25
VPS13CQ709C8 MTCYBP37-201ENST00000510642 1133 ntBASIC0.98□□□□□ -2.25
VPS13CQ709C8 CBX3P2-202ENST00000583365 535 ntBASIC0.98□□□□□ -2.25
VPS13CQ709C8 AC090740.1-201ENST00000623193 2262 ntBASIC0.98□□□□□ -2.25
VPS13CQ709C8 DEFB108F-201ENST00000344638 222 ntBASIC0.98□□□□□ -2.25
VPS13CQ709C8 RNA5SP354-201ENST00000391247 136 ntBASIC0.98□□□□□ -2.25
VPS13CQ709C8 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.98□□□□□ -2.25
VPS13CQ709C8 NDUFS5P3-201ENST00000450668 321 ntBASIC0.98□□□□□ -2.25
VPS13CQ709C8 AP004242.1-201ENST00000533701 349 ntBASIC0.98□□□□□ -2.25
VPS13CQ709C8 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC0.98□□□□□ -2.25
VPS13CQ709C8 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC0.98□□□□□ -2.25
VPS13CQ709C8 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.98□□□□□ -2.25
VPS13CQ709C8 AC005498.1-201ENST00000592125 465 ntBASIC0.98□□□□□ -2.25
VPS13CQ709C8 AC012531.5-201ENST00000611375 151 ntBASIC0.98□□□□□ -2.25
VPS13CQ709C8 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
VPS13CQ709C8 AC006338.1-201ENST00000618453 749 ntBASIC0.98□□□□□ -2.25
VPS13CQ709C8 RNA5SP239-201ENST00000410218 129 ntBASIC0.98□□□□□ -2.25
VPS13CQ709C8 RN7SKP200-201ENST00000410564 320 ntBASIC0.98□□□□□ -2.25
VPS13CQ709C8 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.98□□□□□ -2.25
VPS13CQ709C8 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC0.98□□□□□ -2.25
VPS13CQ709C8 AC006270.2-201ENST00000578523 652 ntBASIC0.98□□□□□ -2.25
VPS13CQ709C8 MIR6086-201ENST00000638065 55 ntBASIC0.98□□□□□ -2.25
VPS13CQ709C8 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
VPS13CQ709C8 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
VPS13CQ709C8 RNU6-716P-201ENST00000365621 103 ntBASIC0.97□□□□□ -2.25
VPS13CQ709C8 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC0.97□□□□□ -2.25
VPS13CQ709C8 GLUD1P4-201ENST00000590914 418 ntBASIC0.97□□□□□ -2.25
VPS13CQ709C8 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC0.97□□□□□ -2.25
VPS13CQ709C8 RNA5SP331-201ENST00000364986 107 ntBASIC0.97□□□□□ -2.25
VPS13CQ709C8 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC0.97□□□□□ -2.25
VPS13CQ709C8 MTND5P25-201ENST00000430499 799 ntBASIC0.97□□□□□ -2.25
VPS13CQ709C8 ARL5AP3-201ENST00000439327 386 ntBASIC0.97□□□□□ -2.25
VPS13CQ709C8 AL357520.1-201ENST00000441557 453 ntBASIC0.97□□□□□ -2.25
VPS13CQ709C8 RPL23AP62-201ENST00000463396 453 ntBASIC0.97□□□□□ -2.25
VPS13CQ709C8 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC0.97□□□□□ -2.25
VPS13CQ709C8 BNIP3P7-201ENST00000605641 516 ntBASIC0.97□□□□□ -2.25
VPS13CQ709C8 AL445493.3-201ENST00000619568 477 ntBASIC0.97□□□□□ -2.25
VPS13CQ709C8 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
VPS13CQ709C8 AC244636.1-201ENST00000421152 228 ntBASIC0.97□□□□□ -2.25
VPS13CQ709C8 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC0.97□□□□□ -2.25
VPS13CQ709C8 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.97□□□□□ -2.25
VPS13CQ709C8 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC0.97□□□□□ -2.25
VPS13CQ709C8 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC0.97□□□□□ -2.25
VPS13CQ709C8 AC097468.3-201ENST00000607956 456 ntBASIC0.97□□□□□ -2.25
VPS13CQ709C8 MIR6513-201ENST00000621188 64 ntBASIC0.97□□□□□ -2.25
VPS13CQ709C8 AC007390.1-201ENST00000415722 356 ntBASIC0.96□□□□□ -2.26
VPS13CQ709C8 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.96□□□□□ -2.26
VPS13CQ709C8 OR9N1P-202ENST00000494289 481 ntBASIC0.96□□□□□ -2.26
VPS13CQ709C8 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC0.96□□□□□ -2.26
VPS13CQ709C8 DUXAP5-201ENST00000529668 529 ntBASIC0.96□□□□□ -2.26
VPS13CQ709C8 U73023.1-201ENST00000603134 700 ntBASIC0.96□□□□□ -2.26
VPS13CQ709C8 AL031775.1-201ENST00000607014 887 ntBASIC0.96□□□□□ -2.26
VPS13CQ709C8 AP003499.2-201ENST00000624100 483 ntBASIC0.96□□□□□ -2.26
VPS13CQ709C8 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
VPS13CQ709C8 AC090515.1-201ENST00000465295 476 ntBASIC0.96□□□□□ -2.26
VPS13CQ709C8 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC0.96□□□□□ -2.26
VPS13CQ709C8 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms