Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 RPS20P32-201ENST00000456044 356 ntBASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 U8.18-201ENST00000459285 133 ntBASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 AC087879.1-201ENST00000474343 374 ntBASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 FTH1P24-201ENST00000503502 462 ntBASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 AC021146.1-201ENST00000511202 716 ntBASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 AC010486.1-201ENST00000511793 424 ntBASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 AL356432.3-201ENST00000568952 465 ntBASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 MIR5187-201ENST00000583479 76 ntBASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 AC018638.8-201ENST00000588755 281 ntBASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 AC024940.5-201ENST00000622889 474 ntBASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 CYP3A51P-201ENST00000633513 256 ntBASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 AP000553.6-201ENST00000641242 118 ntBASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 MFSD8-236ENST00000641509 4050 ntBASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 AC007656.2-201ENST00000624902 4547 ntBASIC3.63□□□□□ -1.83
ZNF549Q6P9A3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 RNU6-845P-201ENST00000362578 103 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 RN7SKP280-201ENST00000364196 304 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 SNORD81.2-201ENST00000365153 76 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 SNORA69-201ENST00000383895 132 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 RNU6-456P-201ENST00000384493 107 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 RPL32P23-201ENST00000397237 405 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 MRPL42P2-201ENST00000403169 426 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 MTHFD2P2-201ENST00000407725 247 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 RNU2-21P-201ENST00000410368 188 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 AL590233.1-201ENST00000430017 456 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 TAAR7P-201ENST00000436141 242 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 SEPT14P3-201ENST00000439401 183 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 AC016691.1-201ENST00000441321 413 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 USP9YP15-201ENST00000442391 422 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 AC007677.1-201ENST00000445757 515 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 AL732372.2-207ENST00000445840 183 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 SEPT14P2-201ENST00000453405 183 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 RPS20P24-201ENST00000457473 361 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 PABPC1P3-201ENST00000469174 459 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 TXNP6-201ENST00000510190 310 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 SEPT14P4-201ENST00000513445 186 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 AC026402.1-201ENST00000513642 170 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 Y_RNA.701-201ENST00000516812 110 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 FO082796.1-201ENST00000523795 183 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 MIR5685-201ENST00000579080 79 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 MIR4795-201ENST00000584182 89 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 AC007038.2-201ENST00000608095 740 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 AL442067.2-201ENST00000614033 363 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 AC079597.1-201ENST00000624306 508 ntBASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ZNF549Q6P9A3 AL157700.1-201ENST00000561973 1432 ntBASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 AL161781.1-201ENST00000354277 403 ntBASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 RNU6-1120P-201ENST00000362988 108 ntBASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 RNU6-108P-201ENST00000365558 107 ntBASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 SNORA20.2-201ENST00000383922 131 ntBASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 Y_RNA.548-201ENST00000384656 105 ntBASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 RNU6-1068P-201ENST00000410958 103 ntBASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 MRPL50P2-201ENST00000416821 482 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms