Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 XIST-201ENST00000416330 750 ntTSL 2 BASIC1.21□□□□□ -2.22
RIF1Q5UIP0 RPL31P35-201ENST00000431058 377 ntBASIC1.21□□□□□ -2.22
RIF1Q5UIP0 FTH1P12-201ENST00000432137 551 ntBASIC1.21□□□□□ -2.22
RIF1Q5UIP0 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.21□□□□□ -2.22
RIF1Q5UIP0 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC1.21□□□□□ -2.22
RIF1Q5UIP0 AC022447.3-201ENST00000506865 495 ntBASIC1.21□□□□□ -2.22
RIF1Q5UIP0 MTND4LP22-201ENST00000508209 276 ntBASIC1.21□□□□□ -2.22
RIF1Q5UIP0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.21□□□□□ -2.22
RIF1Q5UIP0 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.21□□□□□ -2.22
RIF1Q5UIP0 AL590099.1-201ENST00000615276 138 ntBASIC1.21□□□□□ -2.22
RIF1Q5UIP0 AP002967.1-201ENST00000624203 539 ntBASIC1.21□□□□□ -2.22
RIF1Q5UIP0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.2□□□□□ -2.22
RIF1Q5UIP0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.2□□□□□ -2.22
RIF1Q5UIP0 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
RIF1Q5UIP0 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.2□□□□□ -2.22
RIF1Q5UIP0 RNU6-198P-201ENST00000384258 104 ntBASIC1.2□□□□□ -2.22
RIF1Q5UIP0 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.2□□□□□ -2.22
RIF1Q5UIP0 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.2□□□□□ -2.22
RIF1Q5UIP0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.2□□□□□ -2.22
RIF1Q5UIP0 AC008427.1-201ENST00000503102 655 ntBASIC1.2□□□□□ -2.22
RIF1Q5UIP0 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.2□□□□□ -2.22
RIF1Q5UIP0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.2□□□□□ -2.22
RIF1Q5UIP0 PRELID2P1-201ENST00000552837 301 ntBASIC1.2□□□□□ -2.22
RIF1Q5UIP0 AC104229.1-201ENST00000561364 255 ntBASIC1.2□□□□□ -2.22
RIF1Q5UIP0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.2□□□□□ -2.22
RIF1Q5UIP0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
RIF1Q5UIP0 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.2□□□□□ -2.22
RIF1Q5UIP0 SNORD48-201ENST00000364953 64 ntBASIC1.2□□□□□ -2.22
RIF1Q5UIP0 CYCSP48-201ENST00000417124 323 ntBASIC1.2□□□□□ -2.22
RIF1Q5UIP0 SEC63P1-201ENST00000425785 1258 ntBASIC1.2□□□□□ -2.22
RIF1Q5UIP0 AC090774.1-201ENST00000435925 246 ntBASIC1.2□□□□□ -2.22
RIF1Q5UIP0 RSL24D1P2-201ENST00000445584 366 ntBASIC1.2□□□□□ -2.22
RIF1Q5UIP0 DNAJC8P1-201ENST00000554535 372 ntBASIC1.2□□□□□ -2.22
RIF1Q5UIP0 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.2□□□□□ -2.22
RIF1Q5UIP0 AC010487.4-201ENST00000637027 61 ntBASIC1.2□□□□□ -2.22
RIF1Q5UIP0 AC007342.9-201ENST00000623877 1385 ntBASIC1.19□□□□□ -2.22
RIF1Q5UIP0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
RIF1Q5UIP0 XIAPP3-201ENST00000312918 795 ntBASIC1.19□□□□□ -2.22
RIF1Q5UIP0 Y_RNA.85-201ENST00000363014 111 ntBASIC1.19□□□□□ -2.22
RIF1Q5UIP0 RN7SKP200-201ENST00000410564 320 ntBASIC1.19□□□□□ -2.22
RIF1Q5UIP0 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.19□□□□□ -2.22
RIF1Q5UIP0 SNRPEP10-201ENST00000420249 274 ntBASIC1.19□□□□□ -2.22
RIF1Q5UIP0 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC1.19□□□□□ -2.22
RIF1Q5UIP0 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC1.19□□□□□ -2.22
RIF1Q5UIP0 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC1.19□□□□□ -2.22
RIF1Q5UIP0 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
RIF1Q5UIP0 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
RIF1Q5UIP0 RNU6-35P-201ENST00000384530 107 ntBASIC1.18□□□□□ -2.22
RIF1Q5UIP0 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.18□□□□□ -2.22
RIF1Q5UIP0 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC1.18□□□□□ -2.22
RIF1Q5UIP0 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.18□□□□□ -2.22
RIF1Q5UIP0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC1.18□□□□□ -2.22
RIF1Q5UIP0 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC1.18□□□□□ -2.22
RIF1Q5UIP0 DUXAP3-201ENST00000603616 594 ntBASIC1.18□□□□□ -2.22
RIF1Q5UIP0 AC135776.4-201ENST00000624300 1904 ntBASIC1.18□□□□□ -2.22
RIF1Q5UIP0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
RIF1Q5UIP0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
RIF1Q5UIP0 AC111188.2-201ENST00000529697 1387 ntBASIC1.18□□□□□ -2.22
RIF1Q5UIP0 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC1.18□□□□□ -2.22
RIF1Q5UIP0 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.18□□□□□ -2.22
RIF1Q5UIP0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.18□□□□□ -2.22
RIF1Q5UIP0 RPL23AP35-201ENST00000451906 501 ntBASIC1.18□□□□□ -2.22
RIF1Q5UIP0 AC012181.1-201ENST00000479895 423 ntBASIC1.18□□□□□ -2.22
RIF1Q5UIP0 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC1.18□□□□□ -2.22
RIF1Q5UIP0 MIR6086-201ENST00000638065 55 ntBASIC1.18□□□□□ -2.22
RIF1Q5UIP0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
RIF1Q5UIP0 MTND1P23-201ENST00000416931 372 ntBASIC1.17□□□□□ -2.22
RIF1Q5UIP0 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.17□□□□□ -2.22
RIF1Q5UIP0 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.17□□□□□ -2.22
RIF1Q5UIP0 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.17□□□□□ -2.22
RIF1Q5UIP0 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.17□□□□□ -2.22
RIF1Q5UIP0 MIR924-201ENST00000638017 53 ntBASIC1.17□□□□□ -2.22
RIF1Q5UIP0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.17□□□□□ -2.22
RIF1Q5UIP0 OR5AQ1P-203ENST00000641818 1529 ntBASIC1.17□□□□□ -2.22
RIF1Q5UIP0 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
RIF1Q5UIP0 U8.9-201ENST00000365667 134 ntBASIC1.17□□□□□ -2.22
RIF1Q5UIP0 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
RIF1Q5UIP0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
RIF1Q5UIP0 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
RIF1Q5UIP0 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.17□□□□□ -2.22
RIF1Q5UIP0 AL353718.1-201ENST00000451028 517 ntBASIC1.17□□□□□ -2.22
RIF1Q5UIP0 AC089999.1-201ENST00000460336 374 ntBASIC1.17□□□□□ -2.22
RIF1Q5UIP0 MTCO2P9-201ENST00000503214 694 ntBASIC1.17□□□□□ -2.22
RIF1Q5UIP0 RNA5SP384-201ENST00000516615 116 ntBASIC1.17□□□□□ -2.22
RIF1Q5UIP0 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC1.17□□□□□ -2.22
RIF1Q5UIP0 VTA1P2-201ENST00000520205 911 ntBASIC1.17□□□□□ -2.22
RIF1Q5UIP0 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
RIF1Q5UIP0 AC130650.2-201ENST00000618736 2403 ntBASIC1.17□□□□□ -2.22
RIF1Q5UIP0 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.17□□□□□ -2.22
RIF1Q5UIP0 VTRNA1-1-201ENST00000363120 99 ntBASIC1.16□□□□□ -2.22
RIF1Q5UIP0 RNA5SP354-201ENST00000391247 136 ntBASIC1.16□□□□□ -2.22
RIF1Q5UIP0 DPPA2P1-201ENST00000428060 556 ntBASIC1.16□□□□□ -2.22
RIF1Q5UIP0 AL139109.1-201ENST00000455491 297 ntBASIC1.16□□□□□ -2.22
RIF1Q5UIP0 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.16□□□□□ -2.22
RIF1Q5UIP0 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.16□□□□□ -2.22
RIF1Q5UIP0 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.16□□□□□ -2.22
RIF1Q5UIP0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.16□□□□□ -2.22
RIF1Q5UIP0 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
RIF1Q5UIP0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
RIF1Q5UIP0 RNA5SP465-201ENST00000391195 109 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms