Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 SETP2-201ENST00000553886 926 ntBASIC4.39□□□□□ -1.71
LONRF3Q496Y0 AL391840.1-201ENST00000571144 367 ntBASIC4.39□□□□□ -1.71
LONRF3Q496Y0 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.39□□□□□ -1.71
LONRF3Q496Y0 BNIP3P33-201ENST00000598912 569 ntBASIC4.39□□□□□ -1.71
LONRF3Q496Y0 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.39□□□□□ -1.71
LONRF3Q496Y0 AL034351.1-201ENST00000605288 668 ntBASIC4.39□□□□□ -1.71
LONRF3Q496Y0 AC008962.1-201ENST00000605729 304 ntBASIC4.39□□□□□ -1.71
LONRF3Q496Y0 AC004067.1-201ENST00000608733 700 ntBASIC4.39□□□□□ -1.71
LONRF3Q496Y0 AC073534.2-201ENST00000620377 381 ntBASIC4.39□□□□□ -1.71
LONRF3Q496Y0 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.39□□□□□ -1.71
LONRF3Q496Y0 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LONRF3Q496Y0 FAM35DP-201ENST00000323387 2712 ntBASIC4.39□□□□□ -1.71
LONRF3Q496Y0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LONRF3Q496Y0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LONRF3Q496Y0 AC009812.4-201ENST00000569134 1805 ntBASIC4.39□□□□□ -1.71
LONRF3Q496Y0 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.39□□□□□ -1.71
LONRF3Q496Y0 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
LONRF3Q496Y0 AC090740.1-201ENST00000623193 2262 ntBASIC4.38□□□□□ -1.71
LONRF3Q496Y0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LONRF3Q496Y0 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LONRF3Q496Y0 ELF2P3-201ENST00000445099 1506 ntBASIC4.38□□□□□ -1.71
LONRF3Q496Y0 RNU5A-1-201ENST00000362698 116 ntBASIC4.38□□□□□ -1.71
LONRF3Q496Y0 RNA5SP124-201ENST00000362739 110 ntBASIC4.38□□□□□ -1.71
LONRF3Q496Y0 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LONRF3Q496Y0 GSTA9P-201ENST00000406231 611 ntBASIC4.38□□□□□ -1.71
LONRF3Q496Y0 AL359704.1-201ENST00000411586 781 ntBASIC4.38□□□□□ -1.71
LONRF3Q496Y0 AL353777.1-201ENST00000425552 326 ntBASIC4.38□□□□□ -1.71
LONRF3Q496Y0 USP9YP18-201ENST00000425912 695 ntBASIC4.38□□□□□ -1.71
LONRF3Q496Y0 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.38□□□□□ -1.71
LONRF3Q496Y0 AL596276.1-201ENST00000434465 418 ntBASIC4.38□□□□□ -1.71
LONRF3Q496Y0 ARPC3P1-201ENST00000437218 533 ntBASIC4.38□□□□□ -1.71
LONRF3Q496Y0 RBMX2P4-201ENST00000441256 376 ntBASIC4.38□□□□□ -1.71
LONRF3Q496Y0 PSPHP1-201ENST00000450062 261 ntBASIC4.38□□□□□ -1.71
LONRF3Q496Y0 MTCO3P20-201ENST00000454926 688 ntBASIC4.38□□□□□ -1.71
LONRF3Q496Y0 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.38□□□□□ -1.71
LONRF3Q496Y0 UBDP1-202ENST00000457888 382 ntBASIC4.38□□□□□ -1.71
LONRF3Q496Y0 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.38□□□□□ -1.71
LONRF3Q496Y0 RPS3AP50-201ENST00000487064 803 ntBASIC4.38□□□□□ -1.71
LONRF3Q496Y0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.38□□□□□ -1.71
LONRF3Q496Y0 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.38□□□□□ -1.71
LONRF3Q496Y0 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.38□□□□□ -1.71
LONRF3Q496Y0 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.38□□□□□ -1.71
LONRF3Q496Y0 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.38□□□□□ -1.71
LONRF3Q496Y0 NRBF2P1-201ENST00000587407 859 ntBASIC4.38□□□□□ -1.71
LONRF3Q496Y0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.38□□□□□ -1.71
LONRF3Q496Y0 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.38□□□□□ -1.71
LONRF3Q496Y0 DUXAP4-201ENST00000603046 613 ntBASIC4.38□□□□□ -1.71
LONRF3Q496Y0 AL592295.2-201ENST00000612578 206 ntBASIC4.38□□□□□ -1.71
LONRF3Q496Y0 AC009159.1-201ENST00000618386 642 ntBASIC4.38□□□□□ -1.71
LONRF3Q496Y0 AC006111.3-201ENST00000622137 383 ntBASIC4.38□□□□□ -1.71
LONRF3Q496Y0 AL354798.1-201ENST00000622505 329 ntBASIC4.38□□□□□ -1.71
LONRF3Q496Y0 CR392039.5-201ENST00000623201 510 ntBASIC4.38□□□□□ -1.71
LONRF3Q496Y0 AC243312.2-201ENST00000623340 601 ntBASIC4.38□□□□□ -1.71
LONRF3Q496Y0 AC010149.2-201ENST00000637608 315 ntBASIC4.38□□□□□ -1.71
LONRF3Q496Y0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LONRF3Q496Y0 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
LONRF3Q496Y0 NCAPGP1-201ENST00000505112 1814 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.37□□□□□ -1.71
LONRF3Q496Y0 AC005183.1-201ENST00000603687 1979 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LONRF3Q496Y0 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LONRF3Q496Y0 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LONRF3Q496Y0 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.37□□□□□ -1.71
LONRF3Q496Y0 MIR30B-201ENST00000384850 88 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 MIR493-201ENST00000385254 89 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.37□□□□□ -1.71
LONRF3Q496Y0 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 MTATP6P4-201ENST00000427725 675 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 AL451074.3-201ENST00000437709 472 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 HIGD1AP11-201ENST00000438361 280 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.37□□□□□ -1.71
LONRF3Q496Y0 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.37□□□□□ -1.71
LONRF3Q496Y0 AC079448.1-201ENST00000449377 373 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 FGF7P6-202ENST00000451282 293 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 AP1S2P1-201ENST00000457344 379 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 RPL7P15-201ENST00000461190 712 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 RN7SL93P-201ENST00000463035 293 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 HMGN2P13-201ENST00000476476 274 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 KCTD9P5-201ENST00000504141 1170 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LONRF3Q496Y0 AL359273.1-201ENST00000510918 627 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 RNU6-840P-201ENST00000517275 65 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 AL133271.1-201ENST00000538229 291 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.37□□□□□ -1.71
LONRF3Q496Y0 AC123904.2-201ENST00000548059 300 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.37□□□□□ -1.71
LONRF3Q496Y0 AC092325.1-201ENST00000566449 554 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.37□□□□□ -1.71
LONRF3Q496Y0 AC020914.4-201ENST00000597690 277 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 BRDTP1-201ENST00000605735 677 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.37□□□□□ -1.71
LONRF3Q496Y0 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.37□□□□□ -1.71
LONRF3Q496Y0 MIR6130-201ENST00000619419 109 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 AC009268.2-201ENST00000621925 457 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 AC039056.2-201ENST00000622261 511 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 FP236240.3-201ENST00000623061 327 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 AL159972.1-201ENST00000625150 448 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 MIR6863-201ENST00000636112 90 ntBASIC4.37□□□□□ -1.71
LONRF3Q496Y0 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
LONRF3Q496Y0 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 197.2 ms