Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 AL672296.1-201ENST00000427780 2158 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 RNA5SP513-201ENST00000364648 118 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 SMIM11P1-201ENST00000369586 178 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 RNU6-946P-201ENST00000383878 107 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 RNU6-780P-201ENST00000391030 104 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 HSPE1P26-201ENST00000405341 275 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 AL606489.2-201ENST00000433886 234 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 RPL23AP89-201ENST00000439324 255 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 SEPT14P3-201ENST00000439401 183 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 RPS15AP9-201ENST00000439856 381 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 AL732372.2-207ENST00000445840 183 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 FDX1P2-201ENST00000450769 375 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 SEPT14P2-201ENST00000453405 183 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 MRPS17P3-201ENST00000465453 385 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 AC006512.1-201ENST00000468816 291 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 RN7SL132P-201ENST00000478131 296 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 SEPT14P4-201ENST00000513445 186 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 RNU6-927P-201ENST00000516199 100 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 SNORA40.12-201ENST00000516329 111 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 SNORA67.7-201ENST00000516664 135 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 Y_RNA.704-201ENST00000516851 102 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 FO082796.1-201ENST00000523795 183 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 AP001804.3-201ENST00000525146 880 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 ATP5F1P5-201ENST00000526403 760 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 AC092325.1-201ENST00000566449 554 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 AC068135.2-201ENST00000569293 1028 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 AL049634.3-201ENST00000604968 457 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 AP001486.3-201ENST00000615334 372 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 MIR6875-201ENST00000617506 72 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 AC019278.1-201ENST00000623516 479 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 AC093648.1-201ENST00000623546 606 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 RLIMP1-201ENST00000339626 1680 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 MARK2P15-201ENST00000432204 2186 ntBASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC144BQ3MJ40 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 OR4G2P-202ENST00000641004 1759 ntBASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 DEFB109C-201ENST00000382575 264 ntBASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 DEFB109B-201ENST00000382656 264 ntBASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 RNU6-817P-201ENST00000391083 104 ntBASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 RNU6-1158P-201ENST00000391167 107 ntBASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 SNORD66.1-201ENST00000391230 76 ntBASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 MTND1P23-201ENST00000416931 372 ntBASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 CALM2P2-201ENST00000428512 440 ntBASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 RPL37P6-201ENST00000460682 294 ntBASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 RPL31P58-201ENST00000469001 379 ntBASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 AC104164.2-201ENST00000496953 495 ntBASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 RNA5SP73-201ENST00000516744 108 ntBASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 RNU6-677P-201ENST00000516914 101 ntBASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms