Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 TIMM9P1-201ENST00000436122 256 ntBASIC3.06□□□□□ -1.92
SCN1BQ07699 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.06□□□□□ -1.92
SCN1BQ07699 MTCYBP35-201ENST00000503630 1137 ntBASIC3.06□□□□□ -1.92
SCN1BQ07699 ARL4AP2-201ENST00000507378 601 ntBASIC3.06□□□□□ -1.92
SCN1BQ07699 HMGN1P11-201ENST00000508668 303 ntBASIC3.06□□□□□ -1.92
SCN1BQ07699 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.06□□□□□ -1.92
SCN1BQ07699 RNU6-927P-201ENST00000516199 100 ntBASIC3.06□□□□□ -1.92
SCN1BQ07699 RNU6-1003P-201ENST00000517099 105 ntBASIC3.06□□□□□ -1.92
SCN1BQ07699 DUXAP2-201ENST00000519198 589 ntBASIC3.06□□□□□ -1.92
SCN1BQ07699 MTND4LP18-201ENST00000526864 291 ntBASIC3.06□□□□□ -1.92
SCN1BQ07699 AP003122.5-201ENST00000527668 3766 ntBASIC3.06□□□□□ -1.92
SCN1BQ07699 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SCN1BQ07699 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.06□□□□□ -1.92
SCN1BQ07699 MIR4506-201ENST00000584693 77 ntBASIC3.06□□□□□ -1.92
SCN1BQ07699 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.06□□□□□ -1.92
SCN1BQ07699 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.06□□□□□ -1.92
SCN1BQ07699 AC008739.2-201ENST00000597006 317 ntBASIC3.06□□□□□ -1.92
SCN1BQ07699 MTCYBP22-201ENST00000603788 447 ntBASIC3.06□□□□□ -1.92
SCN1BQ07699 FTX_3.1-201ENST00000610451 147 ntBASIC3.06□□□□□ -1.92
SCN1BQ07699 AC004223.4-201ENST00000612426 332 ntBASIC3.06□□□□□ -1.92
SCN1BQ07699 AL355493.4-201ENST00000618530 292 ntBASIC3.06□□□□□ -1.92
SCN1BQ07699 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.06□□□□□ -1.92
SCN1BQ07699 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.06□□□□□ -1.92
SCN1BQ07699 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.06□□□□□ -1.92
SCN1BQ07699 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SCN1BQ07699 AL356274.2-201ENST00000624379 3752 ntBASIC3.05□□□□□ -1.92
SCN1BQ07699 API5P2-201ENST00000397055 1498 ntBASIC3.05□□□□□ -1.92
SCN1BQ07699 AL445523.1-201ENST00000451184 1362 ntBASIC3.05□□□□□ -1.92
SCN1BQ07699 RNU6-501P-201ENST00000364072 100 ntBASIC3.05□□□□□ -1.92
SCN1BQ07699 SNORA51.4-201ENST00000364993 124 ntBASIC3.05□□□□□ -1.92
SCN1BQ07699 MIR767-201ENST00000390228 109 ntBASIC3.05□□□□□ -1.92
SCN1BQ07699 RNA5SP354-201ENST00000391247 136 ntBASIC3.05□□□□□ -1.92
SCN1BQ07699 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.05□□□□□ -1.92
SCN1BQ07699 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.05□□□□□ -1.92
SCN1BQ07699 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.05□□□□□ -1.92
SCN1BQ07699 AC009414.1-201ENST00000427200 443 ntBASIC3.05□□□□□ -1.92
SCN1BQ07699 AC244505.4-201ENST00000434905 287 ntBASIC3.05□□□□□ -1.92
SCN1BQ07699 RPL22P17-201ENST00000438729 315 ntBASIC3.05□□□□□ -1.92
SCN1BQ07699 SSXP5-201ENST00000443473 287 ntBASIC3.05□□□□□ -1.92
SCN1BQ07699 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.05□□□□□ -1.92
SCN1BQ07699 ZNF114P1-201ENST00000453500 292 ntBASIC3.05□□□□□ -1.92
SCN1BQ07699 AC013267.1-201ENST00000458227 267 ntBASIC3.05□□□□□ -1.92
SCN1BQ07699 AC091179.1-201ENST00000461606 579 ntBASIC3.05□□□□□ -1.92
SCN1BQ07699 RN7SL594P-201ENST00000470590 287 ntBASIC3.05□□□□□ -1.92
SCN1BQ07699 AC093663.1-201ENST00000497190 394 ntBASIC3.05□□□□□ -1.92
SCN1BQ07699 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.05□□□□□ -1.92
SCN1BQ07699 MTND4LP31-201ENST00000514859 294 ntBASIC3.05□□□□□ -1.92
SCN1BQ07699 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.05□□□□□ -1.92
SCN1BQ07699 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.05□□□□□ -1.92
SCN1BQ07699 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.05□□□□□ -1.92
SCN1BQ07699 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.05□□□□□ -1.92
SCN1BQ07699 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.05□□□□□ -1.92
SCN1BQ07699 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.05□□□□□ -1.92
SCN1BQ07699 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.05□□□□□ -1.92
SCN1BQ07699 PCMTD1P2-201ENST00000565017 355 ntBASIC3.05□□□□□ -1.92
SCN1BQ07699 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
SCN1BQ07699 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.05□□□□□ -1.92
SCN1BQ07699 HMGN2P15-201ENST00000585707 270 ntBASIC3.05□□□□□ -1.92
SCN1BQ07699 DUXAP4-201ENST00000603046 613 ntBASIC3.05□□□□□ -1.92
SCN1BQ07699 AP001981.2-201ENST00000603241 418 ntBASIC3.05□□□□□ -1.92
SCN1BQ07699 AC067959.1-201ENST00000604334 379 ntBASIC3.05□□□□□ -1.92
SCN1BQ07699 MTND4LP5-201ENST00000605152 292 ntBASIC3.05□□□□□ -1.92
SCN1BQ07699 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.05□□□□□ -1.92
SCN1BQ07699 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.04□□□□□ -1.92
SCN1BQ07699 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SCN1BQ07699 RNU5F-6P-201ENST00000362979 116 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 RNU1-105P-201ENST00000363470 161 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 RNU6-884P-201ENST00000363889 107 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 Y_RNA.245-201ENST00000364493 95 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 SNORD21-201ENST00000383953 95 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 RPL17P12-201ENST00000413391 526 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 RPL32P35-201ENST00000415214 394 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 AL356968.1-201ENST00000416622 474 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 AC005005.2-201ENST00000420779 380 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.04□□□□□ -1.92
SCN1BQ07699 AL389915.1-201ENST00000422463 466 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 AL365496.1-201ENST00000426885 215 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 AL365184.2-201ENST00000431139 435 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.04□□□□□ -1.92
SCN1BQ07699 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.04□□□□□ -1.92
SCN1BQ07699 AC118469.1-201ENST00000442943 488 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 PDSS1P2-201ENST00000449397 678 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 SUMO2P6-201ENST00000505273 288 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 AF131216.2-201ENST00000512316 564 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 RNA5SP217-201ENST00000515959 91 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 RN7SKP282-201ENST00000516824 299 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 RN7SKP258-201ENST00000517151 304 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SCN1BQ07699 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.04□□□□□ -1.92
SCN1BQ07699 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.04□□□□□ -1.92
SCN1BQ07699 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.04□□□□□ -1.92
SCN1BQ07699 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.04□□□□□ -1.92
SCN1BQ07699 AC091489.2-201ENST00000566263 604 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.04□□□□□ -1.92
SCN1BQ07699 RN7SL703P-201ENST00000578485 302 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 MIR5187-201ENST00000583479 76 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.04□□□□□ -1.92
SCN1BQ07699 AC239868.4-201ENST00000608318 671 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 AC009159.1-201ENST00000618386 642 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 AC093591.3-201ENST00000634516 308 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms