Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 AL158156.1-201ENST00000422509 473 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 AC092047.1-201ENST00000424997 240 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 AC092648.1-201ENST00000425870 423 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.15□□□□□ -1.91
UBXN1Q04323 AC093151.1-201ENST00000427711 313 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 AC109583.1-201ENST00000432156 268 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 RPL35AP22-201ENST00000436855 335 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 PIGFP3-201ENST00000441918 722 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.15□□□□□ -1.91
UBXN1Q04323 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.15□□□□□ -1.91
UBXN1Q04323 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.15□□□□□ -1.91
UBXN1Q04323 DUXAP8-207ENST00000456786 622 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.15□□□□□ -1.91
UBXN1Q04323 AP1S2P1-201ENST00000457344 379 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 RPL21P39-201ENST00000463605 483 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 RPL21P93-201ENST00000480465 489 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 AC087190.1-201ENST00000484462 480 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 AC093591.1-201ENST00000491435 481 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 RPL21P129-201ENST00000491732 478 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 AC006445.1-201ENST00000491925 405 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.15□□□□□ -1.91
UBXN1Q04323 RPL21P16-201ENST00000495531 483 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.15□□□□□ -1.91
UBXN1Q04323 RNU6-415P-201ENST00000516252 97 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.15□□□□□ -1.91
UBXN1Q04323 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.15□□□□□ -1.91
UBXN1Q04323 MTND1P8-201ENST00000571424 950 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 AC022662.1-201ENST00000580252 331 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.15□□□□□ -1.91
UBXN1Q04323 MTCO2P2-201ENST00000591258 225 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.15□□□□□ -1.91
UBXN1Q04323 AL596327.1-201ENST00000603629 213 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 AL161729.4-201ENST00000604650 476 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 AC019159.1-201ENST00000605094 187 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 AC245389.1-201ENST00000605141 529 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 AC106052.1-201ENST00000608029 497 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.15□□□□□ -1.91
UBXN1Q04323 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.15□□□□□ -1.91
UBXN1Q04323 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.15□□□□□ -1.91
UBXN1Q04323 AC099063.3-201ENST00000642066 185 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
UBXN1Q04323 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
UBXN1Q04323 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.15□□□□□ -1.91
UBXN1Q04323 ASNSP3-201ENST00000451989 1306 ntBASIC3.15□□□□□ -1.91
UBXN1Q04323 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
UBXN1Q04323 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
UBXN1Q04323 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
UBXN1Q04323 RNU6-217P-201ENST00000384164 104 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 RNU6-432P-201ENST00000384196 109 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
UBXN1Q04323 RNU2-33P-201ENST00000410344 192 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 RNU6-193P-201ENST00000410977 107 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 RNA5SP344-201ENST00000411081 104 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.14□□□□□ -1.91
UBXN1Q04323 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.14□□□□□ -1.91
UBXN1Q04323 AL513477.1-202ENST00000417061 214 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.14□□□□□ -1.91
UBXN1Q04323 AC009414.1-201ENST00000427200 443 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 AC007919.1-201ENST00000429380 217 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 USP9YP24-201ENST00000434374 697 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 USP9YP17-201ENST00000444617 696 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.14□□□□□ -1.91
UBXN1Q04323 COX6CP2-201ENST00000444980 225 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.14□□□□□ -1.91
UBXN1Q04323 PRSS3P4-201ENST00000453323 162 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.14□□□□□ -1.91
UBXN1Q04323 RPL27AP5-201ENST00000469428 449 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 RPS3AP43-201ENST00000479743 781 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 AP002812.1-201ENST00000495378 474 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 AC138853.1-201ENST00000503549 823 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.14□□□□□ -1.91
UBXN1Q04323 AC009812.2-201ENST00000517657 457 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.14□□□□□ -1.91
UBXN1Q04323 AP000857.1-201ENST00000532151 543 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.14□□□□□ -1.91
UBXN1Q04323 TPMTP1-201ENST00000592307 737 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 RPP40P2-201ENST00000603596 712 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 AL035413.2-201ENST00000604801 525 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 AC027449.1-201ENST00000608890 407 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 TUG1_2.1-201ENST00000614234 87 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.14□□□□□ -1.91
UBXN1Q04323 AC079228.1-201ENST00000624774 1049 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 AP003399.1-201ENST00000637534 361 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.14□□□□□ -1.91
UBXN1Q04323 AC009902.3-201ENST00000606235 2172 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 AP000776.1-201ENST00000530032 1663 ntBASIC3.14□□□□□ -1.91
UBXN1Q04323 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
UBXN1Q04323 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
UBXN1Q04323 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
UBXN1Q04323 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
UBXN1Q04323 RNU6-853P-201ENST00000364306 107 ntBASIC3.13□□□□□ -1.91
UBXN1Q04323 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
UBXN1Q04323 RNU6-636P-201ENST00000384598 107 ntBASIC3.13□□□□□ -1.91
UBXN1Q04323 RNVU1-14-201ENST00000384770 164 ntBASIC3.13□□□□□ -1.91
UBXN1Q04323 RNU6-1242P-201ENST00000391052 103 ntBASIC3.13□□□□□ -1.91
UBXN1Q04323 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
UBXN1Q04323 RNU6-584P-201ENST00000410350 95 ntBASIC3.13□□□□□ -1.91
UBXN1Q04323 RN7SKP140-201ENST00000411196 284 ntBASIC3.13□□□□□ -1.91
UBXN1Q04323 AC083875.1-201ENST00000419509 405 ntBASIC3.13□□□□□ -1.91
UBXN1Q04323 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms