Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
IRF9Q00978 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.35□□□□□ -1.71
IRF9Q00978 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.35□□□□□ -1.71
IRF9Q00978 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.35□□□□□ -1.71
IRF9Q00978 RPL21P93-201ENST00000480465 489 ntBASIC4.35□□□□□ -1.71
IRF9Q00978 VN1R104P-201ENST00000505115 1009 ntBASIC4.35□□□□□ -1.71
IRF9Q00978 KLHL2P1-201ENST00000508691 521 ntBASIC4.35□□□□□ -1.71
IRF9Q00978 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.35□□□□□ -1.71
IRF9Q00978 Y_RNA.689-201ENST00000516589 107 ntBASIC4.35□□□□□ -1.71
IRF9Q00978 RN7SKP60-201ENST00000516985 239 ntBASIC4.35□□□□□ -1.71
IRF9Q00978 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.35□□□□□ -1.71
IRF9Q00978 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.35□□□□□ -1.71
IRF9Q00978 AC106782.4-201ENST00000568264 210 ntBASIC4.35□□□□□ -1.71
IRF9Q00978 AC005951.2-201ENST00000576282 495 ntBASIC4.35□□□□□ -1.71
IRF9Q00978 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.35□□□□□ -1.71
IRF9Q00978 Z82243.1-201ENST00000609432 473 ntBASIC4.35□□□□□ -1.71
IRF9Q00978 AC009570.1-201ENST00000609599 745 ntBASIC4.35□□□□□ -1.71
IRF9Q00978 MIR6820-201ENST00000611508 62 ntBASIC4.35□□□□□ -1.71
IRF9Q00978 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.35□□□□□ -1.71
IRF9Q00978 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
IRF9Q00978 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.35□□□□□ -1.71
IRF9Q00978 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
IRF9Q00978 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.35□□□□□ -1.71
IRF9Q00978 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
IRF9Q00978 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
IRF9Q00978 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.35□□□□□ -1.71
IRF9Q00978 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.35□□□□□ -1.71
IRF9Q00978 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
IRF9Q00978 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.34□□□□□ -1.71
IRF9Q00978 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
IRF9Q00978 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
IRF9Q00978 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
IRF9Q00978 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
IRF9Q00978 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
IRF9Q00978 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
IRF9Q00978 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
IRF9Q00978 LINC01109-201ENST00000603837 3081 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 RNU6-335P-201ENST00000364563 113 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 Y_RNA.387-201ENST00000383918 102 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 Y_RNA.394-201ENST00000383942 103 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 SNORA36C-201ENST00000384289 132 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 RNU6-14P-201ENST00000384630 106 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
IRF9Q00978 RNU6-817P-201ENST00000391083 104 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 AC097374.1-203ENST00000400783 485 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
IRF9Q00978 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 AC092809.3-201ENST00000415453 231 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 MTCO1P39-201ENST00000426148 480 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 AC236972.2-201ENST00000434979 310 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 NDUFA5P4-201ENST00000436704 385 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 HMGB3P9-201ENST00000441799 583 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.34□□□□□ -1.71
IRF9Q00978 AC073587.1-201ENST00000447093 876 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 ABCF2P2-201ENST00000450549 296 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.34□□□□□ -1.71
IRF9Q00978 RPL7AP28-201ENST00000464513 571 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 AC110792.1-201ENST00000491826 472 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
IRF9Q00978 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.34□□□□□ -1.71
IRF9Q00978 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.34□□□□□ -1.71
IRF9Q00978 RNU6-189P-201ENST00000516120 101 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 SNORA31.20-201ENST00000517111 133 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.34□□□□□ -1.71
IRF9Q00978 AC090136.1-201ENST00000520009 240 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.34□□□□□ -1.71
IRF9Q00978 AP000889.2-201ENST00000532684 490 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.34□□□□□ -1.71
IRF9Q00978 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
IRF9Q00978 AL442663.2-201ENST00000554385 511 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.34□□□□□ -1.71
IRF9Q00978 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.34□□□□□ -1.71
IRF9Q00978 BDH2P1-201ENST00000602288 736 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.34□□□□□ -1.71
IRF9Q00978 MTND5P42-201ENST00000637720 498 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.34□□□□□ -1.71
IRF9Q00978 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
IRF9Q00978 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
IRF9Q00978 PRO1804-201ENST00000623780 2050 ntBASIC4.34□□□□□ -1.71
IRF9Q00978 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.34□□□□□ -1.72
IRF9Q00978 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
IRF9Q00978 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.34□□□□□ -1.72
IRF9Q00978 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.34□□□□□ -1.72
IRF9Q00978 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
IRF9Q00978 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
IRF9Q00978 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
IRF9Q00978 U3.15-201ENST00000365398 212 ntBASIC4.33□□□□□ -1.72
IRF9Q00978 RNU6-1227P-201ENST00000383981 107 ntBASIC4.33□□□□□ -1.72
IRF9Q00978 RNA5SP87-201ENST00000384155 118 ntBASIC4.33□□□□□ -1.72
IRF9Q00978 RNA5SP219-201ENST00000390940 113 ntBASIC4.33□□□□□ -1.72
IRF9Q00978 SNORD66.1-201ENST00000391230 76 ntBASIC4.33□□□□□ -1.72
IRF9Q00978 EIF4E2P1-201ENST00000393781 255 ntBASIC4.33□□□□□ -1.72
IRF9Q00978 CISD1P1-201ENST00000393907 327 ntBASIC4.33□□□□□ -1.72
IRF9Q00978 MIR298-201ENST00000401212 88 ntBASIC4.33□□□□□ -1.72
IRF9Q00978 RPL7AP25-201ENST00000423357 805 ntBASIC4.33□□□□□ -1.72
IRF9Q00978 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.33□□□□□ -1.72
IRF9Q00978 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.33□□□□□ -1.72
IRF9Q00978 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.33□□□□□ -1.72
IRF9Q00978 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.33□□□□□ -1.72
IRF9Q00978 AC106872.2-201ENST00000494303 480 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms