Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
H3F3AP84243 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.94□□□□□ -2.1
H3F3AP84243 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
H3F3AP84243 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
H3F3AP84243 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
H3F3AP84243 RNU1-91P-201ENST00000364746 163 ntBASIC1.93□□□□□ -2.1
H3F3AP84243 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
H3F3AP84243 RNU6-1005P-201ENST00000384519 107 ntBASIC1.93□□□□□ -2.1
H3F3AP84243 MIR325-201ENST00000385260 98 ntBASIC1.93□□□□□ -2.1
H3F3AP84243 RNA5SP425-201ENST00000410336 112 ntBASIC1.93□□□□□ -2.1
H3F3AP84243 RNU2-15P-201ENST00000410692 191 ntBASIC1.93□□□□□ -2.1
H3F3AP84243 RNA5SP508-201ENST00000411327 119 ntBASIC1.93□□□□□ -2.1
H3F3AP84243 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.93□□□□□ -2.1
H3F3AP84243 AC005005.2-201ENST00000420779 380 ntBASIC1.93□□□□□ -2.1
H3F3AP84243 PTP4A1P7-201ENST00000423476 514 ntBASIC1.93□□□□□ -2.1
H3F3AP84243 ZNF965P-201ENST00000432501 817 ntBASIC1.93□□□□□ -2.1
H3F3AP84243 TPTE2P1-204ENST00000435256 593 ntBASIC1.93□□□□□ -2.1
H3F3AP84243 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.93□□□□□ -2.1
H3F3AP84243 TRGVB-201ENST00000453257 471 ntBASIC1.93□□□□□ -2.1
H3F3AP84243 AC097493.1-201ENST00000463958 372 ntBASIC1.93□□□□□ -2.1
H3F3AP84243 AC011352.3-201ENST00000505162 593 ntBASIC1.93□□□□□ -2.1
H3F3AP84243 AC109464.2-201ENST00000510242 943 ntBASIC1.93□□□□□ -2.1
H3F3AP84243 BTF3P12-201ENST00000519620 469 ntBASIC1.93□□□□□ -2.1
H3F3AP84243 OR5AK1P-201ENST00000524837 922 ntBASIC1.93□□□□□ -2.1
H3F3AP84243 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.93□□□□□ -2.1
H3F3AP84243 MTCYBP27-201ENST00000555160 670 ntBASIC1.93□□□□□ -2.1
H3F3AP84243 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.93□□□□□ -2.1
H3F3AP84243 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.93□□□□□ -2.1
H3F3AP84243 MIR5002-201ENST00000584713 97 ntBASIC1.93□□□□□ -2.1
H3F3AP84243 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.93□□□□□ -2.1
H3F3AP84243 AL121917.1-203ENST00000605534 577 ntBASIC1.93□□□□□ -2.1
H3F3AP84243 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.93□□□□□ -2.1
H3F3AP84243 AC010872.1-201ENST00000624225 675 ntBASIC1.93□□□□□ -2.1
H3F3AP84243 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
H3F3AP84243 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.92□□□□□ -2.1
H3F3AP84243 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
H3F3AP84243 HMGB1P5-201ENST00000255320 642 ntBASIC1.92□□□□□ -2.1
H3F3AP84243 SNORA3A-201ENST00000364113 130 ntBASIC1.92□□□□□ -2.1
H3F3AP84243 AL035405.1-201ENST00000400795 710 ntBASIC1.92□□□□□ -2.1
H3F3AP84243 RN7SKP223-201ENST00000410582 62 ntBASIC1.92□□□□□ -2.1
H3F3AP84243 AL512844.2-201ENST00000433990 593 ntBASIC1.92□□□□□ -2.1
H3F3AP84243 SDR42E1P3-201ENST00000438345 502 ntBASIC1.92□□□□□ -2.1
H3F3AP84243 PGBD4P3-201ENST00000440731 581 ntBASIC1.92□□□□□ -2.1
H3F3AP84243 AC009237.8-201ENST00000445492 379 ntBASIC1.92□□□□□ -2.1
H3F3AP84243 DDX3P2-201ENST00000446138 111 ntBASIC1.92□□□□□ -2.1
H3F3AP84243 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.92□□□□□ -2.1
H3F3AP84243 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.92□□□□□ -2.1
H3F3AP84243 GTF2IP9-201ENST00000502460 301 ntBASIC1.92□□□□□ -2.1
H3F3AP84243 RNU6-416P-201ENST00000516265 103 ntBASIC1.92□□□□□ -2.1
H3F3AP84243 AP001317.1-201ENST00000531194 960 ntBASIC1.92□□□□□ -2.1
H3F3AP84243 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.92□□□□□ -2.1
H3F3AP84243 AC091544.4-201ENST00000555268 342 ntBASIC1.92□□□□□ -2.1
H3F3AP84243 AC025918.2-201ENST00000558683 763 ntBASIC1.92□□□□□ -2.1
H3F3AP84243 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.92□□□□□ -2.1
H3F3AP84243 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
H3F3AP84243 MIR6840-201ENST00000611937 71 ntBASIC1.92□□□□□ -2.1
H3F3AP84243 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
H3F3AP84243 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.92□□□□□ -2.1
H3F3AP84243 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
H3F3AP84243 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
H3F3AP84243 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
H3F3AP84243 AC022336.2-201ENST00000568966 2538 ntBASIC1.92□□□□□ -2.1
H3F3AP84243 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.92□□□□□ -2.1
H3F3AP84243 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
H3F3AP84243 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.91□□□□□ -2.1
H3F3AP84243 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.91□□□□□ -2.1
H3F3AP84243 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.91□□□□□ -2.1
H3F3AP84243 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.91□□□□□ -2.1
H3F3AP84243 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
H3F3AP84243 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
H3F3AP84243 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.91□□□□□ -2.1
H3F3AP84243 SNORA6-201ENST00000384033 151 ntBASIC1.91□□□□□ -2.1
H3F3AP84243 NPM1P10-201ENST00000398310 865 ntBASIC1.91□□□□□ -2.1
H3F3AP84243 RPS3AP24-201ENST00000407896 734 ntBASIC1.91□□□□□ -2.1
H3F3AP84243 HMGB3P2-201ENST00000411913 584 ntBASIC1.91□□□□□ -2.1
H3F3AP84243 RPS7P9-201ENST00000414704 586 ntBASIC1.91□□□□□ -2.1
H3F3AP84243 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.91□□□□□ -2.1
H3F3AP84243 SRIP2-201ENST00000428470 166 ntBASIC1.91□□□□□ -2.1
H3F3AP84243 ARF4P4-201ENST00000439608 520 ntBASIC1.91□□□□□ -2.1
H3F3AP84243 AC092170.1-201ENST00000440211 356 ntBASIC1.91□□□□□ -2.1
H3F3AP84243 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.91□□□□□ -2.1
H3F3AP84243 AL591719.1-201ENST00000444669 744 ntBASIC1.91□□□□□ -2.1
H3F3AP84243 AL929288.2-201ENST00000446368 407 ntBASIC1.91□□□□□ -2.1
H3F3AP84243 NDUFA5P7-201ENST00000452914 242 ntBASIC1.91□□□□□ -2.1
H3F3AP84243 RFC5P1-201ENST00000454419 874 ntBASIC1.91□□□□□ -2.1
H3F3AP84243 ANKRD26P4-201ENST00000455755 950 ntBASIC1.91□□□□□ -2.1
H3F3AP84243 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.91□□□□□ -2.1
H3F3AP84243 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
H3F3AP84243 AC079804.2-201ENST00000490376 200 ntBASIC1.91□□□□□ -2.1
H3F3AP84243 GZMAP1-201ENST00000503054 631 ntBASIC1.91□□□□□ -2.1
H3F3AP84243 SUMO2P6-201ENST00000505273 288 ntBASIC1.91□□□□□ -2.1
H3F3AP84243 AC104090.1-201ENST00000506341 1171 ntBASIC1.91□□□□□ -2.1
H3F3AP84243 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC1.91□□□□□ -2.1
H3F3AP84243 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.91□□□□□ -2.1
H3F3AP84243 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.91□□□□□ -2.1
H3F3AP84243 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.91□□□□□ -2.1
H3F3AP84243 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.91□□□□□ -2.1
H3F3AP84243 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.91□□□□□ -2.1
H3F3AP84243 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.91□□□□□ -2.1
H3F3AP84243 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms