Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CCNA1P78396 MTCYBP11-201ENST00000447254 1109 ntBASIC2.86□□□□□ -1.95
CCNA1P78396 RPL31P41-201ENST00000477967 372 ntBASIC2.86□□□□□ -1.95
CCNA1P78396 RPS15AP34-201ENST00000487776 387 ntBASIC2.86□□□□□ -1.95
CCNA1P78396 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.86□□□□□ -1.95
CCNA1P78396 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.86□□□□□ -1.95
CCNA1P78396 AC234781.5-201ENST00000508429 271 ntBASIC2.86□□□□□ -1.95
CCNA1P78396 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.86□□□□□ -1.95
CCNA1P78396 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.86□□□□□ -1.95
CCNA1P78396 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CCNA1P78396 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.86□□□□□ -1.95
CCNA1P78396 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.86□□□□□ -1.95
CCNA1P78396 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.86□□□□□ -1.95
CCNA1P78396 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.86□□□□□ -1.95
CCNA1P78396 AC024560.3-201ENST00000608482 349 ntBASIC2.86□□□□□ -1.95
CCNA1P78396 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.86□□□□□ -1.95
CCNA1P78396 LRRC77P-213ENST00000637727 880 ntBASIC2.86□□□□□ -1.95
CCNA1P78396 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.86□□□□□ -1.95
CCNA1P78396 AC092447.7-201ENST00000422212 1621 ntBASIC2.86□□□□□ -1.95
CCNA1P78396 AL512283.1-201ENST00000606756 1384 ntBASIC2.86□□□□□ -1.95
CCNA1P78396 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CCNA1P78396 CR848007.1-201ENST00000442354 1699 ntBASIC2.85□□□□□ -1.95
CCNA1P78396 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCNA1P78396 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCNA1P78396 RNU1-73P-201ENST00000383971 164 ntBASIC2.85□□□□□ -1.95
CCNA1P78396 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.85□□□□□ -1.95
CCNA1P78396 AC080125.1-201ENST00000414888 684 ntBASIC2.85□□□□□ -1.95
CCNA1P78396 NANOGP5-201ENST00000424456 877 ntBASIC2.85□□□□□ -1.95
CCNA1P78396 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.85□□□□□ -1.95
CCNA1P78396 RPL26P6-201ENST00000440913 438 ntBASIC2.85□□□□□ -1.95
CCNA1P78396 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCNA1P78396 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.85□□□□□ -1.95
CCNA1P78396 ZNF971P-201ENST00000562068 1249 ntBASIC2.85□□□□□ -1.95
CCNA1P78396 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.85□□□□□ -1.95
CCNA1P78396 LARP7P2-201ENST00000575306 125 ntBASIC2.85□□□□□ -1.95
CCNA1P78396 OR4K8P-201ENST00000578842 1048 ntBASIC2.85□□□□□ -1.95
CCNA1P78396 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.85□□□□□ -1.95
CCNA1P78396 MIR4524B-201ENST00000581569 115 ntBASIC2.85□□□□□ -1.95
CCNA1P78396 VN1R78P-201ENST00000597393 564 ntBASIC2.85□□□□□ -1.95
CCNA1P78396 AL158827.2-201ENST00000602494 330 ntBASIC2.85□□□□□ -1.95
CCNA1P78396 AP001521.1-201ENST00000609150 300 ntBASIC2.85□□□□□ -1.95
CCNA1P78396 AC069234.5-201ENST00000611056 416 ntBASIC2.85□□□□□ -1.95
CCNA1P78396 AC245517.5-201ENST00000611529 162 ntBASIC2.85□□□□□ -1.95
CCNA1P78396 AC034102.8-201ENST00000615146 484 ntBASIC2.85□□□□□ -1.95
CCNA1P78396 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.85□□□□□ -1.95
CCNA1P78396 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CCNA1P78396 AC010872.1-201ENST00000624225 675 ntBASIC2.85□□□□□ -1.95
CCNA1P78396 AL691447.3-201ENST00000635020 330 ntBASIC2.85□□□□□ -1.95
CCNA1P78396 AP003399.1-201ENST00000637534 361 ntBASIC2.85□□□□□ -1.95
CCNA1P78396 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
CCNA1P78396 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCNA1P78396 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.85□□□□□ -1.95
CCNA1P78396 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
CCNA1P78396 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
CCNA1P78396 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CCNA1P78396 RPS3AP24-201ENST00000407896 734 ntBASIC2.84□□□□□ -1.95
CCNA1P78396 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.84□□□□□ -1.95
CCNA1P78396 RN7SKP223-201ENST00000410582 62 ntBASIC2.84□□□□□ -1.95
CCNA1P78396 AC007064.1-201ENST00000412238 351 ntBASIC2.84□□□□□ -1.95
CCNA1P78396 MTCO2P1-201ENST00000424648 477 ntBASIC2.84□□□□□ -1.95
CCNA1P78396 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.84□□□□□ -1.95
CCNA1P78396 AL512844.2-201ENST00000433990 593 ntBASIC2.84□□□□□ -1.95
CCNA1P78396 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.84□□□□□ -1.95
CCNA1P78396 AL714022.1-201ENST00000439897 151 ntBASIC2.84□□□□□ -1.95
CCNA1P78396 ST13P20-201ENST00000447996 1065 ntBASIC2.84□□□□□ -1.95
CCNA1P78396 RPS15AP27-201ENST00000449183 343 ntBASIC2.84□□□□□ -1.95
CCNA1P78396 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.84□□□□□ -1.95
CCNA1P78396 MTCO3P11-201ENST00000455103 774 ntBASIC2.84□□□□□ -1.95
CCNA1P78396 AC116337.2-201ENST00000477662 156 ntBASIC2.84□□□□□ -1.95
CCNA1P78396 RPL23AP70-201ENST00000483361 460 ntBASIC2.84□□□□□ -1.95
CCNA1P78396 MTCO2P9-201ENST00000503214 694 ntBASIC2.84□□□□□ -1.95
CCNA1P78396 AP000857.1-201ENST00000532151 543 ntBASIC2.84□□□□□ -1.95
CCNA1P78396 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.84□□□□□ -1.95
CCNA1P78396 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.84□□□□□ -1.95
CCNA1P78396 AC044913.1-201ENST00000557200 430 ntBASIC2.84□□□□□ -1.95
CCNA1P78396 AC090888.1-201ENST00000561335 1141 ntBASIC2.84□□□□□ -1.95
CCNA1P78396 AC010546.1-201ENST00000569391 485 ntBASIC2.84□□□□□ -1.95
CCNA1P78396 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.84□□□□□ -1.95
CCNA1P78396 MIR4275-201ENST00000636486 87 ntBASIC2.84□□□□□ -1.95
CCNA1P78396 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.84□□□□□ -1.96
CCNA1P78396 AL022578.1-201ENST00000439330 1433 ntBASIC2.84□□□□□ -1.96
CCNA1P78396 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CCNA1P78396 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CCNA1P78396 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.83□□□□□ -1.96
CCNA1P78396 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CCNA1P78396 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.83□□□□□ -1.96
CCNA1P78396 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CCNA1P78396 VTRNA1-1-201ENST00000363120 99 ntBASIC2.83□□□□□ -1.96
CCNA1P78396 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.83□□□□□ -1.96
CCNA1P78396 MTATP6P27-201ENST00000416987 621 ntBASIC2.83□□□□□ -1.96
CCNA1P78396 DPH3P2-201ENST00000422618 250 ntBASIC2.83□□□□□ -1.96
CCNA1P78396 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.83□□□□□ -1.96
CCNA1P78396 OR4K11P-201ENST00000431829 904 ntBASIC2.83□□□□□ -1.96
CCNA1P78396 FAM103A2P-201ENST00000444122 354 ntBASIC2.83□□□□□ -1.96
CCNA1P78396 AL353691.1-201ENST00000451332 387 ntBASIC2.83□□□□□ -1.96
CCNA1P78396 OFD1P3Y-201ENST00000453312 783 ntBASIC2.83□□□□□ -1.96
CCNA1P78396 AC008628.1-201ENST00000508663 265 ntBASIC2.83□□□□□ -1.96
CCNA1P78396 AC113155.1-201ENST00000511141 769 ntBASIC2.83□□□□□ -1.96
CCNA1P78396 RNU6-928P-201ENST00000516876 104 ntBASIC2.83□□□□□ -1.96
CCNA1P78396 RNU6-334P-201ENST00000517072 102 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms