Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.71□□□□□ -1.98
LIM2P55344 AP000254.1-201ENST00000609934 520 ntBASIC2.71□□□□□ -1.98
LIM2P55344 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.71□□□□□ -1.98
LIM2P55344 AL138880.2-201ENST00000616214 239 ntBASIC2.71□□□□□ -1.98
LIM2P55344 AC068831.7-201ENST00000616954 363 ntBASIC2.71□□□□□ -1.98
LIM2P55344 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.71□□□□□ -1.98
LIM2P55344 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.71□□□□□ -1.98
LIM2P55344 AC007490.1-201ENST00000624321 703 ntBASIC2.71□□□□□ -1.98
LIM2P55344 PCMTD1P7-201ENST00000634506 357 ntBASIC2.71□□□□□ -1.98
LIM2P55344 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
LIM2P55344 AC103706.2-201ENST00000638080 240 ntBASIC2.71□□□□□ -1.98
LIM2P55344 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.71□□□□□ -1.98
LIM2P55344 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LIM2P55344 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.7□□□□□ -1.98
LIM2P55344 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LIM2P55344 ASNSP3-201ENST00000451989 1306 ntBASIC2.7□□□□□ -1.98
LIM2P55344 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.7□□□□□ -1.98
LIM2P55344 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.7□□□□□ -1.98
LIM2P55344 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.7□□□□□ -1.98
LIM2P55344 RNU6-223P-201ENST00000362830 107 ntBASIC2.7□□□□□ -1.98
LIM2P55344 RNA5SP88-201ENST00000365560 109 ntBASIC2.7□□□□□ -1.98
LIM2P55344 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
LIM2P55344 RNU6-637P-201ENST00000384050 107 ntBASIC2.7□□□□□ -1.98
LIM2P55344 MIR181A2-201ENST00000384863 110 ntBASIC2.7□□□□□ -1.98
LIM2P55344 MIR512-1-201ENST00000384913 84 ntBASIC2.7□□□□□ -1.98
LIM2P55344 AL590004.2-201ENST00000404787 371 ntBASIC2.7□□□□□ -1.98
LIM2P55344 FAT1P1-201ENST00000406588 507 ntBASIC2.7□□□□□ -1.98
LIM2P55344 RNU6-1077P-201ENST00000410506 102 ntBASIC2.7□□□□□ -1.98
LIM2P55344 NDUFB4P7-201ENST00000423198 363 ntBASIC2.7□□□□□ -1.98
LIM2P55344 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.7□□□□□ -1.98
LIM2P55344 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.7□□□□□ -1.98
LIM2P55344 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.7□□□□□ -1.98
LIM2P55344 RPL35AP22-201ENST00000436855 335 ntBASIC2.7□□□□□ -1.98
LIM2P55344 RSU1P2-202ENST00000437884 485 ntBASIC2.7□□□□□ -1.98
LIM2P55344 HIGD1AP11-201ENST00000438361 280 ntBASIC2.7□□□□□ -1.98
LIM2P55344 THAP5P1-201ENST00000439089 262 ntBASIC2.7□□□□□ -1.98
LIM2P55344 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.7□□□□□ -1.98
LIM2P55344 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.7□□□□□ -1.98
LIM2P55344 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.7□□□□□ -1.98
LIM2P55344 AL606662.1-201ENST00000445763 553 ntBASIC2.7□□□□□ -1.98
LIM2P55344 AP000542.1-201ENST00000448473 371 ntBASIC2.7□□□□□ -1.98
LIM2P55344 NIPA2P5-201ENST00000452282 464 ntBASIC2.7□□□□□ -1.98
LIM2P55344 ARPC3P2-201ENST00000457786 533 ntBASIC2.7□□□□□ -1.98
LIM2P55344 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.7□□□□□ -1.98
LIM2P55344 AC111000.2-201ENST00000507775 550 ntBASIC2.7□□□□□ -1.98
LIM2P55344 CBX3P3-201ENST00000508108 532 ntBASIC2.7□□□□□ -1.98
LIM2P55344 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
LIM2P55344 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.7□□□□□ -1.98
LIM2P55344 SNORA3.4-201ENST00000515969 96 ntBASIC2.7□□□□□ -1.98
LIM2P55344 RN7SKP287-201ENST00000516546 266 ntBASIC2.7□□□□□ -1.98
LIM2P55344 SCARNA13-201ENST00000516672 275 ntBASIC2.7□□□□□ -1.98
LIM2P55344 AC087276.1-201ENST00000529659 480 ntBASIC2.7□□□□□ -1.98
LIM2P55344 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.7□□□□□ -1.98
LIM2P55344 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.7□□□□□ -1.98
LIM2P55344 AC011260.1-201ENST00000578420 472 ntBASIC2.7□□□□□ -1.98
LIM2P55344 MIR4506-201ENST00000584693 77 ntBASIC2.7□□□□□ -1.98
LIM2P55344 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.7□□□□□ -1.98
LIM2P55344 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.7□□□□□ -1.98
LIM2P55344 AL451007.1-201ENST00000595491 289 ntBASIC2.7□□□□□ -1.98
LIM2P55344 AC021755.4-201ENST00000616620 456 ntBASIC2.7□□□□□ -1.98
LIM2P55344 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LIM2P55344 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
LIM2P55344 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LIM2P55344 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.7□□□□□ -1.98
LIM2P55344 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LIM2P55344 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LIM2P55344 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
LIM2P55344 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
LIM2P55344 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.7□□□□□ -1.98
LIM2P55344 AP003122.5-201ENST00000527668 3766 ntBASIC2.7□□□□□ -1.98
LIM2P55344 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LIM2P55344 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LIM2P55344 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.69□□□□□ -1.98
LIM2P55344 AC108206.1-201ENST00000570186 4159 ntBASIC2.69□□□□□ -1.98
LIM2P55344 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
LIM2P55344 RPL9P7-201ENST00000330965 580 ntBASIC2.69□□□□□ -1.98
LIM2P55344 RNY4P24-201ENST00000362735 96 ntBASIC2.69□□□□□ -1.98
LIM2P55344 RNU6-1214P-201ENST00000363650 109 ntBASIC2.69□□□□□ -1.98
LIM2P55344 RNU6-289P-201ENST00000364093 107 ntBASIC2.69□□□□□ -1.98
LIM2P55344 RNU6-777P-201ENST00000364265 104 ntBASIC2.69□□□□□ -1.98
LIM2P55344 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.69□□□□□ -1.98
LIM2P55344 DYNLT3P1-201ENST00000378574 347 ntBASIC2.69□□□□□ -1.98
LIM2P55344 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LIM2P55344 RN7SKP123-201ENST00000410732 291 ntBASIC2.69□□□□□ -1.98
LIM2P55344 RPL23AP39-201ENST00000415533 405 ntBASIC2.69□□□□□ -1.98
LIM2P55344 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.69□□□□□ -1.98
LIM2P55344 TMEM167AP1-201ENST00000423409 219 ntBASIC2.69□□□□□ -1.98
LIM2P55344 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.69□□□□□ -1.98
LIM2P55344 USP9YP36-201ENST00000424581 829 ntBASIC2.69□□□□□ -1.98
LIM2P55344 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.69□□□□□ -1.98
LIM2P55344 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.69□□□□□ -1.98
LIM2P55344 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.69□□□□□ -1.98
LIM2P55344 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.69□□□□□ -1.98
LIM2P55344 AL590383.1-201ENST00000428602 75 ntBASIC2.69□□□□□ -1.98
LIM2P55344 NDUFB4P6-201ENST00000436819 366 ntBASIC2.69□□□□□ -1.98
LIM2P55344 MTCYBP3-201ENST00000445588 1137 ntBASIC2.69□□□□□ -1.98
LIM2P55344 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.69□□□□□ -1.98
LIM2P55344 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.69□□□□□ -1.98
LIM2P55344 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.69□□□□□ -1.98
LIM2P55344 HMGN2P13-201ENST00000476476 274 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms