Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.63□□□□□ -1.99
CDH6P55285 RNU6-1225P-201ENST00000516336 65 ntBASIC2.63□□□□□ -1.99
CDH6P55285 RNU6-1282P-201ENST00000516735 96 ntBASIC2.63□□□□□ -1.99
CDH6P55285 RNU6-928P-201ENST00000516876 104 ntBASIC2.63□□□□□ -1.99
CDH6P55285 SNORA31.22-201ENST00000517204 135 ntBASIC2.63□□□□□ -1.99
CDH6P55285 RN7SKP40-201ENST00000517211 242 ntBASIC2.63□□□□□ -1.99
CDH6P55285 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.63□□□□□ -1.99
CDH6P55285 SLC2A13P1-201ENST00000531560 322 ntBASIC2.63□□□□□ -1.99
CDH6P55285 MIR5194-201ENST00000582634 120 ntBASIC2.63□□□□□ -1.99
CDH6P55285 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.63□□□□□ -1.99
CDH6P55285 AP001429.1-201ENST00000602568 530 ntBASIC2.63□□□□□ -1.99
CDH6P55285 AC013553.2-201ENST00000604244 589 ntBASIC2.63□□□□□ -1.99
CDH6P55285 AL512427.1-201ENST00000618593 349 ntBASIC2.63□□□□□ -1.99
CDH6P55285 AC073308.1-201ENST00000623696 305 ntBASIC2.63□□□□□ -1.99
CDH6P55285 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.63□□□□□ -1.99
CDH6P55285 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.63□□□□□ -1.99
CDH6P55285 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CDH6P55285 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CDH6P55285 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CDH6P55285 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.63□□□□□ -1.99
CDH6P55285 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CDH6P55285 MTCO1P9-201ENST00000505577 1534 ntBASIC2.63□□□□□ -1.99
CDH6P55285 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDH6P55285 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.62□□□□□ -1.99
CDH6P55285 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDH6P55285 RNU6-28P-201ENST00000362378 107 ntBASIC2.62□□□□□ -1.99
CDH6P55285 RNA5SP393-201ENST00000363423 117 ntBASIC2.62□□□□□ -1.99
CDH6P55285 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CDH6P55285 Y_RNA.578-201ENST00000390903 88 ntBASIC2.62□□□□□ -1.99
CDH6P55285 RNA5SP354-201ENST00000391247 136 ntBASIC2.62□□□□□ -1.99
CDH6P55285 AC069282.1-201ENST00000411911 526 ntBASIC2.62□□□□□ -1.99
CDH6P55285 RPL7P37-201ENST00000425095 738 ntBASIC2.62□□□□□ -1.99
CDH6P55285 AL512844.2-201ENST00000433990 593 ntBASIC2.62□□□□□ -1.99
CDH6P55285 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.62□□□□□ -1.99
CDH6P55285 MTND4P6-201ENST00000438297 472 ntBASIC2.62□□□□□ -1.99
CDH6P55285 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.62□□□□□ -1.99
CDH6P55285 AL109741.2-201ENST00000455561 343 ntBASIC2.62□□□□□ -1.99
CDH6P55285 MTND4LP3-201ENST00000468320 276 ntBASIC2.62□□□□□ -1.99
CDH6P55285 HMGB1P28-201ENST00000507778 552 ntBASIC2.62□□□□□ -1.99
CDH6P55285 SCARNA15.2-201ENST00000516409 127 ntBASIC2.62□□□□□ -1.99
CDH6P55285 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.62□□□□□ -1.99
CDH6P55285 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.62□□□□□ -1.99
CDH6P55285 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.62□□□□□ -1.99
CDH6P55285 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.62□□□□□ -1.99
CDH6P55285 AC011451.2-201ENST00000604303 598 ntBASIC2.62□□□□□ -1.99
CDH6P55285 AL390208.1-201ENST00000605885 644 ntBASIC2.62□□□□□ -1.99
CDH6P55285 AC004067.1-201ENST00000608733 700 ntBASIC2.62□□□□□ -1.99
CDH6P55285 AL590099.1-201ENST00000615276 138 ntBASIC2.62□□□□□ -1.99
CDH6P55285 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.62□□□□□ -1.99
CDH6P55285 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDH6P55285 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDH6P55285 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDH6P55285 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CDH6P55285 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CDH6P55285 AC006378.2-201ENST00000623178 2476 ntBASIC2.61□□□□□ -1.99
CDH6P55285 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CDH6P55285 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CDH6P55285 RNU6-1122P-201ENST00000384449 107 ntBASIC2.61□□□□□ -1.99
CDH6P55285 MIR196B-201ENST00000384852 84 ntBASIC2.61□□□□□ -1.99
CDH6P55285 MIR627-201ENST00000384979 97 ntBASIC2.61□□□□□ -1.99
CDH6P55285 MIR514A1-201ENST00000385133 98 ntBASIC2.61□□□□□ -1.99
CDH6P55285 SNORA40.4-201ENST00000390971 128 ntBASIC2.61□□□□□ -1.99
CDH6P55285 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.61□□□□□ -1.99
CDH6P55285 AL031679.1-201ENST00000400616 525 ntBASIC2.61□□□□□ -1.99
CDH6P55285 RNU6-193P-201ENST00000410977 107 ntBASIC2.61□□□□□ -1.99
CDH6P55285 AL161449.1-201ENST00000414531 1199 ntBASIC2.61□□□□□ -1.99
CDH6P55285 MTND4P3-201ENST00000417829 541 ntBASIC2.61□□□□□ -1.99
CDH6P55285 MRPS36P1-201ENST00000421291 307 ntBASIC2.61□□□□□ -1.99
CDH6P55285 AC018630.2-202ENST00000422992 927 ntBASIC2.61□□□□□ -1.99
CDH6P55285 PTP4A1P7-201ENST00000423476 514 ntBASIC2.61□□□□□ -1.99
CDH6P55285 SUMO1P4-201ENST00000429430 302 ntBASIC2.61□□□□□ -1.99
CDH6P55285 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.61□□□□□ -1.99
CDH6P55285 AL109933.2-201ENST00000452651 260 ntBASIC2.61□□□□□ -1.99
CDH6P55285 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.61□□□□□ -1.99
CDH6P55285 AC133134.1-201ENST00000466800 359 ntBASIC2.61□□□□□ -1.99
CDH6P55285 AC069528.1-202ENST00000482888 637 ntBASIC2.61□□□□□ -1.99
CDH6P55285 RPS15AP34-201ENST00000487776 387 ntBASIC2.61□□□□□ -1.99
CDH6P55285 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CDH6P55285 RPS27P26-201ENST00000494583 239 ntBASIC2.61□□□□□ -1.99
CDH6P55285 AC008427.1-201ENST00000503102 655 ntBASIC2.61□□□□□ -1.99
CDH6P55285 AC112198.4-201ENST00000515450 351 ntBASIC2.61□□□□□ -1.99
CDH6P55285 RN7SKP31-201ENST00000516354 278 ntBASIC2.61□□□□□ -1.99
CDH6P55285 RNU6-528P-201ENST00000516926 100 ntBASIC2.61□□□□□ -1.99
CDH6P55285 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.61□□□□□ -1.99
CDH6P55285 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.61□□□□□ -1.99
CDH6P55285 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.61□□□□□ -1.99
CDH6P55285 AC124947.2-202ENST00000552735 133 ntBASIC2.61□□□□□ -1.99
CDH6P55285 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.61□□□□□ -1.99
CDH6P55285 AC106782.4-201ENST00000568264 210 ntBASIC2.61□□□□□ -1.99
CDH6P55285 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.61□□□□□ -1.99
CDH6P55285 VN1R78P-201ENST00000597393 564 ntBASIC2.61□□□□□ -1.99
CDH6P55285 AL356575.1-201ENST00000603008 283 ntBASIC2.61□□□□□ -1.99
CDH6P55285 AL160237.3-201ENST00000604114 1013 ntBASIC2.61□□□□□ -1.99
CDH6P55285 AL136363.1-201ENST00000605349 337 ntBASIC2.61□□□□□ -1.99
CDH6P55285 AC023158.2-201ENST00000614876 543 ntBASIC2.61□□□□□ -1.99
CDH6P55285 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.61□□□□□ -1.99
CDH6P55285 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.61□□□□□ -1.99
CDH6P55285 MIR4275-201ENST00000636486 87 ntBASIC2.61□□□□□ -1.99
CDH6P55285 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CDH6P55285 AL049641.1-201ENST00000441055 1948 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms