Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.24□□□□□ -1.89
SLC6A12P48065 AL390208.1-201ENST00000605885 644 ntBASIC3.24□□□□□ -1.89
SLC6A12P48065 AC069200.1-201ENST00000609511 323 ntBASIC3.24□□□□□ -1.89
SLC6A12P48065 AC084757.4-201ENST00000616350 526 ntBASIC3.24□□□□□ -1.89
SLC6A12P48065 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.24□□□□□ -1.89
SLC6A12P48065 AL356321.1-201ENST00000621360 228 ntBASIC3.24□□□□□ -1.89
SLC6A12P48065 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.24□□□□□ -1.89
SLC6A12P48065 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SLC6A12P48065 AL021368.2-201ENST00000606125 5352 ntBASIC3.24□□□□□ -1.89
SLC6A12P48065 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SLC6A12P48065 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SLC6A12P48065 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.23□□□□□ -1.89
SLC6A12P48065 TAB3P1-202ENST00000452645 1634 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.23□□□□□ -1.89
SLC6A12P48065 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SLC6A12P48065 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SLC6A12P48065 RNU1-70P-201ENST00000362618 164 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 Y_RNA.41-201ENST00000362646 102 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 RNU5E-5P-201ENST00000365379 116 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 SNORA70.4-201ENST00000365509 134 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 MIR135A2-201ENST00000384854 100 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 AL031679.1-201ENST00000400616 525 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 MIR1305-201ENST00000408300 86 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 RNU6-248P-201ENST00000410720 107 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 AC007899.1-201ENST00000412776 775 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.23□□□□□ -1.89
SLC6A12P48065 BX842559.1-201ENST00000419615 532 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.23□□□□□ -1.89
SLC6A12P48065 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.23□□□□□ -1.89
SLC6A12P48065 MTCO2P5-201ENST00000422621 426 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.23□□□□□ -1.89
SLC6A12P48065 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.23□□□□□ -1.89
SLC6A12P48065 USP9YP28-201ENST00000435142 589 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 RPL37P21-201ENST00000435890 276 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 HIGD1AP11-201ENST00000438361 280 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.23□□□□□ -1.89
SLC6A12P48065 HMGB3P11-201ENST00000440127 604 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.23□□□□□ -1.89
SLC6A12P48065 AL121871.1-201ENST00000443413 436 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.23□□□□□ -1.89
SLC6A12P48065 RAC1P7-201ENST00000445367 377 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.23□□□□□ -1.89
SLC6A12P48065 SSXP1-201ENST00000453640 473 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 AC106872.3-201ENST00000495104 446 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.23□□□□□ -1.89
SLC6A12P48065 AC024589.1-201ENST00000512207 263 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 AC034159.1-201ENST00000513885 583 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 AC093677.1-201ENST00000514414 678 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 RNU6-720P-201ENST00000516363 108 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 ERHP1-201ENST00000523006 310 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 AP001804.3-201ENST00000525146 880 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.23□□□□□ -1.89
SLC6A12P48065 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SLC6A12P48065 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.23□□□□□ -1.89
SLC6A12P48065 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.23□□□□□ -1.89
SLC6A12P48065 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.23□□□□□ -1.89
SLC6A12P48065 MTND1P15-201ENST00000579262 949 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.23□□□□□ -1.89
SLC6A12P48065 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.23□□□□□ -1.89
SLC6A12P48065 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.23□□□□□ -1.89
SLC6A12P48065 DEFB131E-202ENST00000602581 683 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 AC004853.1-201ENST00000604902 698 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SLC6A12P48065 AL139286.2-201ENST00000606838 396 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 TUG1_1.1-201ENST00000610654 145 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.23□□□□□ -1.89
SLC6A12P48065 Z99129.1-201ENST00000612510 255 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 AL596245.1-201ENST00000618994 362 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 AC099842.1-201ENST00000619919 596 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 AC068792.1-201ENST00000621354 417 ntBASIC3.23□□□□□ -1.89
SLC6A12P48065 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SLC6A12P48065 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SLC6A12P48065 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
SLC6A12P48065 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SLC6A12P48065 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.22□□□□□ -1.89
SLC6A12P48065 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
SLC6A12P48065 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SLC6A12P48065 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.22□□□□□ -1.89
SLC6A12P48065 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.22□□□□□ -1.89
SLC6A12P48065 MIR208A-201ENST00000362287 71 ntBASIC3.22□□□□□ -1.89
SLC6A12P48065 MIR183-201ENST00000384958 110 ntBASIC3.22□□□□□ -1.89
SLC6A12P48065 MIR34B-201ENST00000385076 84 ntBASIC3.22□□□□□ -1.89
SLC6A12P48065 MIR320C1-201ENST00000408566 88 ntBASIC3.22□□□□□ -1.89
SLC6A12P48065 RNA5SP229-201ENST00000410809 99 ntBASIC3.22□□□□□ -1.89
SLC6A12P48065 SSXP9-201ENST00000417503 292 ntBASIC3.22□□□□□ -1.89
SLC6A12P48065 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC6A12P48065 AC233728.2-201ENST00000425348 757 ntBASIC3.22□□□□□ -1.89
SLC6A12P48065 AL356583.2-201ENST00000426536 280 ntBASIC3.22□□□□□ -1.89
SLC6A12P48065 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC6A12P48065 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC6A12P48065 MTCYBP45-201ENST00000435243 565 ntBASIC3.22□□□□□ -1.89
SLC6A12P48065 AC091862.1-201ENST00000438016 1100 ntBASIC3.22□□□□□ -1.89
SLC6A12P48065 MTND1P34-201ENST00000438556 671 ntBASIC3.22□□□□□ -1.89
SLC6A12P48065 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC6A12P48065 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC6A12P48065 HMGN1P18-201ENST00000457642 277 ntBASIC3.22□□□□□ -1.89
SLC6A12P48065 HMGN2P13-201ENST00000476476 274 ntBASIC3.22□□□□□ -1.89
SLC6A12P48065 RNU6-405P-201ENST00000516637 110 ntBASIC3.22□□□□□ -1.89
SLC6A12P48065 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.22□□□□□ -1.89
SLC6A12P48065 AC004024.1-201ENST00000549244 247 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms