Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.03□□□□□ -1.92
TNFRSF4P43489 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.03□□□□□ -1.92
TNFRSF4P43489 AP003485.2-201ENST00000623636 610 ntBASIC3.03□□□□□ -1.92
TNFRSF4P43489 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
TNFRSF4P43489 MIR4275-201ENST00000636486 87 ntBASIC3.03□□□□□ -1.92
TNFRSF4P43489 AC103706.2-201ENST00000638080 240 ntBASIC3.03□□□□□ -1.92
TNFRSF4P43489 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TNFRSF4P43489 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.03□□□□□ -1.92
TNFRSF4P43489 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.02□□□□□ -1.93
TNFRSF4P43489 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.02□□□□□ -1.93
TNFRSF4P43489 AC073325.2-201ENST00000339545 159 ntBASIC3.02□□□□□ -1.93
TNFRSF4P43489 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
TNFRSF4P43489 RNU6-637P-201ENST00000384050 107 ntBASIC3.02□□□□□ -1.93
TNFRSF4P43489 RSL24D1P4-201ENST00000400938 484 ntBASIC3.02□□□□□ -1.93
TNFRSF4P43489 SKINT1L-201ENST00000401057 817 ntBASIC3.02□□□□□ -1.93
TNFRSF4P43489 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.02□□□□□ -1.93
TNFRSF4P43489 TPMTP3-201ENST00000411928 735 ntBASIC3.02□□□□□ -1.93
TNFRSF4P43489 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.02□□□□□ -1.93
TNFRSF4P43489 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.02□□□□□ -1.93
TNFRSF4P43489 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.02□□□□□ -1.93
TNFRSF4P43489 AL645937.1-202ENST00000421799 937 ntBASIC3.02□□□□□ -1.93
TNFRSF4P43489 AC011233.1-201ENST00000422812 283 ntBASIC3.02□□□□□ -1.93
TNFRSF4P43489 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.02□□□□□ -1.93
TNFRSF4P43489 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.02□□□□□ -1.93
TNFRSF4P43489 RPS6P15-201ENST00000431996 751 ntBASIC3.02□□□□□ -1.93
TNFRSF4P43489 BX679664.1-201ENST00000434429 253 ntBASIC3.02□□□□□ -1.93
TNFRSF4P43489 RPS20P5-201ENST00000434808 360 ntBASIC3.02□□□□□ -1.93
TNFRSF4P43489 RPS24P13-201ENST00000442520 397 ntBASIC3.02□□□□□ -1.93
TNFRSF4P43489 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.02□□□□□ -1.93
TNFRSF4P43489 MTCO1P27-201ENST00000448269 226 ntBASIC3.02□□□□□ -1.93
TNFRSF4P43489 RPL36AP33-201ENST00000450395 310 ntBASIC3.02□□□□□ -1.93
TNFRSF4P43489 HSPE1P6-201ENST00000479457 291 ntBASIC3.02□□□□□ -1.93
TNFRSF4P43489 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.02□□□□□ -1.93
TNFRSF4P43489 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.02□□□□□ -1.93
TNFRSF4P43489 AC111000.2-201ENST00000507775 550 ntBASIC3.02□□□□□ -1.93
TNFRSF4P43489 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.02□□□□□ -1.93
TNFRSF4P43489 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.02□□□□□ -1.93
TNFRSF4P43489 AC034159.1-201ENST00000513885 583 ntBASIC3.02□□□□□ -1.93
TNFRSF4P43489 SNORD59.2-201ENST00000516873 68 ntBASIC3.02□□□□□ -1.93
TNFRSF4P43489 SCARNA20.6-201ENST00000517251 106 ntBASIC3.02□□□□□ -1.93
TNFRSF4P43489 AC087276.1-201ENST00000529659 480 ntBASIC3.02□□□□□ -1.93
TNFRSF4P43489 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.02□□□□□ -1.93
TNFRSF4P43489 AC011602.1-201ENST00000546484 331 ntBASIC3.02□□□□□ -1.93
TNFRSF4P43489 MRPS36P5-201ENST00000551909 298 ntBASIC3.02□□□□□ -1.93
TNFRSF4P43489 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.02□□□□□ -1.93
TNFRSF4P43489 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.02□□□□□ -1.93
TNFRSF4P43489 MIR5047-201ENST00000579212 100 ntBASIC3.02□□□□□ -1.93
TNFRSF4P43489 MIR3162-201ENST00000581818 82 ntBASIC3.02□□□□□ -1.93
TNFRSF4P43489 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
TNFRSF4P43489 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.02□□□□□ -1.93
TNFRSF4P43489 AC009268.2-201ENST00000621925 457 ntBASIC3.02□□□□□ -1.93
TNFRSF4P43489 AC012321.1-201ENST00000561622 1588 ntBASIC3.02□□□□□ -1.93
TNFRSF4P43489 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.02□□□□□ -1.93
TNFRSF4P43489 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TNFRSF4P43489 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.02□□□□□ -1.93
TNFRSF4P43489 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TNFRSF4P43489 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TNFRSF4P43489 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TNFRSF4P43489 AC011460.1-201ENST00000636268 1834 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
TNFRSF4P43489 RNU6-931P-201ENST00000363850 107 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 RNU6-853P-201ENST00000364306 107 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 AP002088.1-201ENST00000382740 395 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 RNU6-114P-201ENST00000384704 105 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 RNU6-253P-201ENST00000384730 105 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 RNU1-101P-201ENST00000391171 127 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TNFRSF4P43489 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TNFRSF4P43489 RNA5SP38-201ENST00000410750 119 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 MTCO1P17-201ENST00000411522 491 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 PIGPP2-201ENST00000411569 458 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.01□□□□□ -1.93
TNFRSF4P43489 PPP1R11P2-201ENST00000423543 382 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 AL022400.1-201ENST00000423946 935 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.01□□□□□ -1.93
TNFRSF4P43489 AL356867.1-201ENST00000429623 299 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.01□□□□□ -1.93
TNFRSF4P43489 AC105272.1-201ENST00000438604 198 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.01□□□□□ -1.93
TNFRSF4P43489 RPS3AP22-201ENST00000488297 769 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 RN7SL20P-201ENST00000488827 297 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 AC034222.1-201ENST00000494052 532 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 AC104685.1-201ENST00000502445 371 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.01□□□□□ -1.93
TNFRSF4P43489 HIGD1AP13-201ENST00000509878 289 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.01□□□□□ -1.93
TNFRSF4P43489 SNORA31.1-201ENST00000515993 133 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 SNORA31.5-201ENST00000516190 133 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 SNORA31.22-201ENST00000517204 135 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 HMGN1P28-201ENST00000521340 364 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 OR5G4P-201ENST00000525251 760 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.01□□□□□ -1.93
TNFRSF4P43489 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.01□□□□□ -1.93
TNFRSF4P43489 AC027807.1-201ENST00000559921 996 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.01□□□□□ -1.93
TNFRSF4P43489 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.01□□□□□ -1.93
TNFRSF4P43489 AC068313.1-201ENST00000604028 1008 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 AC025811.1-201ENST00000604312 472 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 AL450489.1-201ENST00000612071 468 ntBASIC3.01□□□□□ -1.93
TNFRSF4P43489 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms