Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.79□□□□□ -1.64
CCNFP41002 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.79□□□□□ -1.64
CCNFP41002 RNU7-167P-201ENST00000459160 62 ntBASIC4.79□□□□□ -1.64
CCNFP41002 SNORD108-201ENST00000459332 71 ntBASIC4.79□□□□□ -1.64
CCNFP41002 RPL7P42-201ENST00000481005 679 ntBASIC4.79□□□□□ -1.64
CCNFP41002 AC025164.1-201ENST00000496249 478 ntBASIC4.79□□□□□ -1.64
CCNFP41002 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.79□□□□□ -1.64
CCNFP41002 OR5D15P-201ENST00000531671 942 ntBASIC4.79□□□□□ -1.64
CCNFP41002 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.79□□□□□ -1.64
CCNFP41002 AC063950.1-201ENST00000552036 308 ntBASIC4.79□□□□□ -1.64
CCNFP41002 AL049839.1-201ENST00000556151 657 ntBASIC4.79□□□□□ -1.64
CCNFP41002 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.79□□□□□ -1.64
CCNFP41002 AC209154.1-201ENST00000582156 337 ntBASIC4.79□□□□□ -1.64
CCNFP41002 SDR42E1P2-201ENST00000614861 481 ntBASIC4.79□□□□□ -1.64
CCNFP41002 FAM157A-202ENST00000615155 405 ntBASIC4.79□□□□□ -1.64
CCNFP41002 AC091925.1-201ENST00000623204 462 ntBASIC4.79□□□□□ -1.64
CCNFP41002 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.79□□□□□ -1.64
CCNFP41002 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.79□□□□□ -1.64
CCNFP41002 AL669831.3-213ENST00000636676 183 ntBASIC4.79□□□□□ -1.64
CCNFP41002 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCNFP41002 AL049641.1-201ENST00000441055 1948 ntBASIC4.79□□□□□ -1.64
CCNFP41002 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.79□□□□□ -1.64
CCNFP41002 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.79□□□□□ -1.64
CCNFP41002 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCNFP41002 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCNFP41002 TLK1P1-201ENST00000456760 2440 ntBASIC4.78□□□□□ -1.64
CCNFP41002 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCNFP41002 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.78□□□□□ -1.64
CCNFP41002 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCNFP41002 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CCNFP41002 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCNFP41002 Y_RNA.28-201ENST00000362554 111 ntBASIC4.78□□□□□ -1.64
CCNFP41002 RNU1-20P-201ENST00000363314 162 ntBASIC4.78□□□□□ -1.64
CCNFP41002 Y_RNA.135-201ENST00000363439 95 ntBASIC4.78□□□□□ -1.64
CCNFP41002 SNORD3H-201ENST00000384486 214 ntBASIC4.78□□□□□ -1.64
CCNFP41002 RNU6-310P-201ENST00000384655 107 ntBASIC4.78□□□□□ -1.64
CCNFP41002 RNU6-1106P-201ENST00000390845 107 ntBASIC4.78□□□□□ -1.64
CCNFP41002 AL645733.1-201ENST00000402250 217 ntBASIC4.78□□□□□ -1.64
CCNFP41002 AL356057.3-201ENST00000402607 340 ntBASIC4.78□□□□□ -1.64
CCNFP41002 AL391417.1-201ENST00000404100 426 ntBASIC4.78□□□□□ -1.64
CCNFP41002 Y_RNA.646-201ENST00000410980 101 ntBASIC4.78□□□□□ -1.64
CCNFP41002 RNU6-954P-201ENST00000411355 107 ntBASIC4.78□□□□□ -1.64
CCNFP41002 OR2AM1P-201ENST00000422137 422 ntBASIC4.78□□□□□ -1.64
CCNFP41002 RPL7P28-201ENST00000437739 740 ntBASIC4.78□□□□□ -1.64
CCNFP41002 PTMAP6-201ENST00000439110 327 ntBASIC4.78□□□□□ -1.64
CCNFP41002 TXNP1-201ENST00000441872 371 ntBASIC4.78□□□□□ -1.64
CCNFP41002 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.78□□□□□ -1.64
CCNFP41002 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.78□□□□□ -1.64
CCNFP41002 ELOCP24-201ENST00000456370 334 ntBASIC4.78□□□□□ -1.64
CCNFP41002 NIP7P2-201ENST00000485801 544 ntBASIC4.78□□□□□ -1.64
CCNFP41002 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.78□□□□□ -1.64
CCNFP41002 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.78□□□□□ -1.64
CCNFP41002 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCNFP41002 PTP4A1P4-201ENST00000512479 322 ntBASIC4.78□□□□□ -1.64
CCNFP41002 GMPSP1-201ENST00000514075 579 ntBASIC4.78□□□□□ -1.64
CCNFP41002 RNU2-69P-201ENST00000516061 100 ntBASIC4.78□□□□□ -1.64
CCNFP41002 SNORA14.1-201ENST00000516113 141 ntBASIC4.78□□□□□ -1.64
CCNFP41002 RNU6-352P-201ENST00000516908 107 ntBASIC4.78□□□□□ -1.64
CCNFP41002 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.78□□□□□ -1.64
CCNFP41002 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.78□□□□□ -1.64
CCNFP41002 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.78□□□□□ -1.64
CCNFP41002 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.78□□□□□ -1.64
CCNFP41002 AC093249.4-201ENST00000564755 259 ntBASIC4.78□□□□□ -1.64
CCNFP41002 ATP5J2P6-201ENST00000565203 266 ntBASIC4.78□□□□□ -1.64
CCNFP41002 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.78□□□□□ -1.64
CCNFP41002 SNORD84-203ENST00000584275 78 ntBASIC4.78□□□□□ -1.64
CCNFP41002 AC067852.3-201ENST00000589177 561 ntBASIC4.78□□□□□ -1.64
CCNFP41002 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.78□□□□□ -1.64
CCNFP41002 XIAPP1-201ENST00000603162 600 ntBASIC4.78□□□□□ -1.64
CCNFP41002 HMGN2P28-201ENST00000606102 262 ntBASIC4.78□□□□□ -1.64
CCNFP41002 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.78□□□□□ -1.64
CCNFP41002 PISRT1.1-201ENST00000616930 107 ntBASIC4.78□□□□□ -1.64
CCNFP41002 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
CCNFP41002 MIR4275-201ENST00000636486 87 ntBASIC4.78□□□□□ -1.64
CCNFP41002 AL136964.1-201ENST00000622038 2990 ntBASIC4.78□□□□□ -1.64
CCNFP41002 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.78□□□□□ -1.64
CCNFP41002 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
CCNFP41002 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCNFP41002 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.77□□□□□ -1.65
CCNFP41002 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCNFP41002 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.77□□□□□ -1.65
CCNFP41002 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.77□□□□□ -1.65
CCNFP41002 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCNFP41002 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCNFP41002 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.77□□□□□ -1.65
CCNFP41002 RNA5SP123-201ENST00000363244 119 ntBASIC4.77□□□□□ -1.65
CCNFP41002 RNA5SP372-201ENST00000390836 115 ntBASIC4.77□□□□□ -1.65
CCNFP41002 AL360182.1-201ENST00000397433 468 ntBASIC4.77□□□□□ -1.65
CCNFP41002 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.77□□□□□ -1.65
CCNFP41002 RPL7AP73-201ENST00000413490 353 ntBASIC4.77□□□□□ -1.65
CCNFP41002 RPL7P10-201ENST00000417407 739 ntBASIC4.77□□□□□ -1.65
CCNFP41002 AC244098.2-201ENST00000422068 99 ntBASIC4.77□□□□□ -1.65
CCNFP41002 AL590632.1-201ENST00000424289 371 ntBASIC4.77□□□□□ -1.65
CCNFP41002 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.77□□□□□ -1.65
CCNFP41002 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.77□□□□□ -1.65
CCNFP41002 RN7SL808P-201ENST00000496066 299 ntBASIC4.77□□□□□ -1.65
CCNFP41002 AC021146.2-201ENST00000504736 556 ntBASIC4.77□□□□□ -1.65
CCNFP41002 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.77□□□□□ -1.65
CCNFP41002 AC022634.1-201ENST00000520765 532 ntBASIC4.77□□□□□ -1.65
CCNFP41002 AC008033.2-201ENST00000542626 177 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms