Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MIR9-1-201ENST00000385198 89 ntBASIC2.43□□□□□ -2.02
RFC3P40938 AL139039.1-201ENST00000401900 692 ntBASIC2.43□□□□□ -2.02
RFC3P40938 HMGB1P17-201ENST00000403495 628 ntBASIC2.43□□□□□ -2.02
RFC3P40938 RNU2-42P-201ENST00000410697 113 ntBASIC2.43□□□□□ -2.02
RFC3P40938 AC007435.1-201ENST00000421086 415 ntBASIC2.43□□□□□ -2.02
RFC3P40938 AL139413.1-201ENST00000421309 217 ntBASIC2.43□□□□□ -2.02
RFC3P40938 MTCO2P5-201ENST00000422621 426 ntBASIC2.43□□□□□ -2.02
RFC3P40938 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.43□□□□□ -2.02
RFC3P40938 AL590383.1-201ENST00000428602 75 ntBASIC2.43□□□□□ -2.02
RFC3P40938 MTCYBP45-201ENST00000435243 565 ntBASIC2.43□□□□□ -2.02
RFC3P40938 SDCBPP1-201ENST00000440192 890 ntBASIC2.43□□□□□ -2.02
RFC3P40938 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.43□□□□□ -2.02
RFC3P40938 AL109741.2-201ENST00000455561 343 ntBASIC2.43□□□□□ -2.02
RFC3P40938 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.43□□□□□ -2.02
RFC3P40938 AC147055.4-201ENST00000504399 745 ntBASIC2.43□□□□□ -2.02
RFC3P40938 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.43□□□□□ -2.02
RFC3P40938 AC117522.3-201ENST00000507974 584 ntBASIC2.43□□□□□ -2.02
RFC3P40938 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.43□□□□□ -2.02
RFC3P40938 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.43□□□□□ -2.02
RFC3P40938 RNU6-1028P-201ENST00000517164 93 ntBASIC2.43□□□□□ -2.02
RFC3P40938 MTCO1P47-201ENST00000523889 1271 ntBASIC2.43□□□□□ -2.02
RFC3P40938 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.43□□□□□ -2.02
RFC3P40938 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.43□□□□□ -2.02
RFC3P40938 AC090615.1-201ENST00000577519 154 ntBASIC2.43□□□□□ -2.02
RFC3P40938 MIR3912-201ENST00000577566 105 ntBASIC2.43□□□□□ -2.02
RFC3P40938 AC013553.2-201ENST00000604244 589 ntBASIC2.43□□□□□ -2.02
RFC3P40938 AC243773.3-201ENST00000613270 256 ntBASIC2.43□□□□□ -2.02
RFC3P40938 AC023158.2-201ENST00000614876 543 ntBASIC2.43□□□□□ -2.02
RFC3P40938 MIR6817-201ENST00000615588 66 ntBASIC2.43□□□□□ -2.02
RFC3P40938 AC010338.1-201ENST00000621823 717 ntBASIC2.43□□□□□ -2.02
RFC3P40938 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.43□□□□□ -2.02
RFC3P40938 OR5H6-203ENST00000642105 978 ntBASIC2.43□□□□□ -2.02
RFC3P40938 AC005832.2-201ENST00000538921 1430 ntBASIC2.42□□□□□ -2.02
RFC3P40938 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.42□□□□□ -2.02
RFC3P40938 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.42□□□□□ -2.02
RFC3P40938 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.42□□□□□ -2.02
RFC3P40938 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RFC3P40938 MIR26A1-201ENST00000362205 77 ntBASIC2.42□□□□□ -2.02
RFC3P40938 RNA5SP393-201ENST00000363423 117 ntBASIC2.42□□□□□ -2.02
RFC3P40938 U3.12-201ENST00000364498 214 ntBASIC2.42□□□□□ -2.02
RFC3P40938 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RFC3P40938 RNU6-1035P-201ENST00000384477 107 ntBASIC2.42□□□□□ -2.02
RFC3P40938 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RFC3P40938 AL512633.1-201ENST00000399931 655 ntBASIC2.42□□□□□ -2.02
RFC3P40938 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.42□□□□□ -2.02
RFC3P40938 RPL7P37-201ENST00000425095 738 ntBASIC2.42□□□□□ -2.02
RFC3P40938 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.42□□□□□ -2.02
RFC3P40938 CR769767.1-201ENST00000436337 346 ntBASIC2.42□□□□□ -2.02
RFC3P40938 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.42□□□□□ -2.02
RFC3P40938 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.42□□□□□ -2.02
RFC3P40938 AC234775.1-201ENST00000454247 670 ntBASIC2.42□□□□□ -2.02
RFC3P40938 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.42□□□□□ -2.02
RFC3P40938 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.42□□□□□ -2.02
RFC3P40938 AL135752.1-201ENST00000479477 471 ntBASIC2.42□□□□□ -2.02
RFC3P40938 AC103975.1-201ENST00000482506 483 ntBASIC2.42□□□□□ -2.02
RFC3P40938 AC092902.1-201ENST00000486999 259 ntBASIC2.42□□□□□ -2.02
RFC3P40938 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.42□□□□□ -2.02
RFC3P40938 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.42□□□□□ -2.02
RFC3P40938 AC096725.1-201ENST00000514266 313 ntBASIC2.42□□□□□ -2.02
RFC3P40938 RNU6-1225P-201ENST00000516336 65 ntBASIC2.42□□□□□ -2.02
RFC3P40938 RN7SKP31-201ENST00000516354 278 ntBASIC2.42□□□□□ -2.02
RFC3P40938 RNA5SP148-201ENST00000516527 94 ntBASIC2.42□□□□□ -2.02
RFC3P40938 RNU6-1282P-201ENST00000516735 96 ntBASIC2.42□□□□□ -2.02
RFC3P40938 RNU6-928P-201ENST00000516876 104 ntBASIC2.42□□□□□ -2.02
RFC3P40938 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.42□□□□□ -2.02
RFC3P40938 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.42□□□□□ -2.02
RFC3P40938 SLC2A13P1-201ENST00000531560 322 ntBASIC2.42□□□□□ -2.02
RFC3P40938 AL133271.1-201ENST00000538229 291 ntBASIC2.42□□□□□ -2.02
RFC3P40938 AC092451.2-201ENST00000538746 658 ntBASIC2.42□□□□□ -2.02
RFC3P40938 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.42□□□□□ -2.02
RFC3P40938 AC128657.1-201ENST00000549459 145 ntBASIC2.42□□□□□ -2.02
RFC3P40938 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.42□□□□□ -2.02
RFC3P40938 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.42□□□□□ -2.02
RFC3P40938 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.42□□□□□ -2.02
RFC3P40938 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.42□□□□□ -2.02
RFC3P40938 MIR4446-201ENST00000578505 67 ntBASIC2.42□□□□□ -2.02
RFC3P40938 AC126365.2-201ENST00000580630 379 ntBASIC2.42□□□□□ -2.02
RFC3P40938 MIR4635-201ENST00000583759 79 ntBASIC2.42□□□□□ -2.02
RFC3P40938 AP001429.1-201ENST00000602568 530 ntBASIC2.42□□□□□ -2.02
RFC3P40938 AC008277.2-201ENST00000605196 797 ntBASIC2.42□□□□□ -2.02
RFC3P40938 AC107294.1-201ENST00000609524 467 ntBASIC2.42□□□□□ -2.02
RFC3P40938 AC104237.2-201ENST00000612456 443 ntBASIC2.42□□□□□ -2.02
RFC3P40938 AL512427.1-201ENST00000618593 349 ntBASIC2.42□□□□□ -2.02
RFC3P40938 AC079597.1-201ENST00000624306 508 ntBASIC2.42□□□□□ -2.02
RFC3P40938 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
RFC3P40938 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RFC3P40938 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RFC3P40938 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.41□□□□□ -2.02
RFC3P40938 SNORD62.1-201ENST00000362541 86 ntBASIC2.41□□□□□ -2.02
RFC3P40938 RNA5SP68-201ENST00000363885 119 ntBASIC2.41□□□□□ -2.02
RFC3P40938 AL513477.1-202ENST00000417061 214 ntBASIC2.41□□□□□ -2.02
RFC3P40938 RPL7L1P10-201ENST00000427790 463 ntBASIC2.41□□□□□ -2.02
RFC3P40938 ARPC3P1-201ENST00000437218 533 ntBASIC2.41□□□□□ -2.02
RFC3P40938 AL714022.1-201ENST00000439897 151 ntBASIC2.41□□□□□ -2.02
RFC3P40938 RNF2P1-201ENST00000442955 1010 ntBASIC2.41□□□□□ -2.02
RFC3P40938 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.41□□□□□ -2.02
RFC3P40938 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.41□□□□□ -2.02
RFC3P40938 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.41□□□□□ -2.02
RFC3P40938 AC073901.1-201ENST00000462471 408 ntBASIC2.41□□□□□ -2.02
RFC3P40938 AC116337.2-201ENST00000477662 156 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms