Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 OR2AM1P-201ENST00000422137 422 ntBASIC4.48□□□□□ -1.69
HOXC12P31275 EI24P4-201ENST00000423683 1078 ntBASIC4.48□□□□□ -1.69
HOXC12P31275 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXC12P31275 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXC12P31275 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.48□□□□□ -1.69
HOXC12P31275 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXC12P31275 SNRPGP5-201ENST00000456003 220 ntBASIC4.48□□□□□ -1.69
HOXC12P31275 RPL37P6-201ENST00000460682 294 ntBASIC4.48□□□□□ -1.69
HOXC12P31275 AC079140.5-201ENST00000507882 310 ntBASIC4.48□□□□□ -1.69
HOXC12P31275 MTCYBP40-201ENST00000509390 1135 ntBASIC4.48□□□□□ -1.69
HOXC12P31275 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXC12P31275 SNORA31.20-201ENST00000517111 133 ntBASIC4.48□□□□□ -1.69
HOXC12P31275 AC021006.3-201ENST00000530771 192 ntBASIC4.48□□□□□ -1.69
HOXC12P31275 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXC12P31275 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXC12P31275 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXC12P31275 AC006349.1-201ENST00000555526 235 ntBASIC4.48□□□□□ -1.69
HOXC12P31275 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
HOXC12P31275 AC209154.1-201ENST00000582156 337 ntBASIC4.48□□□□□ -1.69
HOXC12P31275 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXC12P31275 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXC12P31275 MIR6128-201ENST00000615528 109 ntBASIC4.48□□□□□ -1.69
HOXC12P31275 AC010378.1-201ENST00000619270 362 ntBASIC4.48□□□□□ -1.69
HOXC12P31275 AC090337.1-201ENST00000579651 2074 ntBASIC4.48□□□□□ -1.69
HOXC12P31275 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC12P31275 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC12P31275 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC12P31275 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC12P31275 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC12P31275 AC004925.1-201ENST00000624256 2706 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC12P31275 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC12P31275 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
HOXC12P31275 MTND5P10-201ENST00000603719 1809 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC12P31275 SNORA33.2-201ENST00000365413 134 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC12P31275 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC12P31275 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
HOXC12P31275 Y_RNA.395-201ENST00000383945 109 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 RNU6-1160P-201ENST00000384546 104 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 AL035079.1-201ENST00000405210 287 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 RNU6-954P-201ENST00000411355 107 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC12P31275 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXC12P31275 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC12P31275 NRBF2P3-201ENST00000432731 865 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 RPL7P28-201ENST00000437739 740 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 MTCO3P10-201ENST00000455912 772 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 AC087884.1-201ENST00000469738 328 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC12P31275 AC009901.1-201ENST00000506703 541 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 COX6B1P5-201ENST00000509843 249 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.47□□□□□ -1.69
HOXC12P31275 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC12P31275 RANP9-201ENST00000519957 271 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 AC090151.1-201ENST00000520784 730 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 CYCSP27-201ENST00000527643 293 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC12P31275 RN7SL652P-201ENST00000577769 300 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 AC069061.3-201ENST00000582254 823 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 MIR4737-201ENST00000583979 81 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 AC016925.2-201ENST00000605108 242 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 AL355802.3-201ENST00000607571 545 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 AC019193.3-201ENST00000609144 554 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 AL157817.1-201ENST00000614264 790 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 AC083809.1-201ENST00000615051 472 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 AC004825.2-201ENST00000616634 455 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 AC019206.1-201ENST00000621938 425 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXC12P31275 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXC12P31275 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXC12P31275 AC007823.1-201ENST00000569932 1566 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 SAMMSON-226ENST00000642089 1582 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC12P31275 IRF5P1-201ENST00000504852 2164 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXC12P31275 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC12P31275 AL034549.2-201ENST00000618285 3373 ntBASIC4.47□□□□□ -1.69
HOXC12P31275 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HOXC12P31275 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HOXC12P31275 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.46□□□□□ -1.69
HOXC12P31275 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.46□□□□□ -1.69
HOXC12P31275 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC12P31275 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC12P31275 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
HOXC12P31275 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
HOXC12P31275 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
HOXC12P31275 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC12P31275 AC079741.1-201ENST00000321498 212 ntBASIC4.46□□□□□ -1.7
HOXC12P31275 Y_RNA.31-201ENST00000362574 102 ntBASIC4.46□□□□□ -1.7
HOXC12P31275 RNU6-371P-201ENST00000364283 108 ntBASIC4.46□□□□□ -1.7
HOXC12P31275 SNORA2.3-201ENST00000383920 135 ntBASIC4.46□□□□□ -1.7
HOXC12P31275 RNU6-128P-201ENST00000383976 107 ntBASIC4.46□□□□□ -1.7
HOXC12P31275 RPS16P5-201ENST00000406501 404 ntBASIC4.46□□□□□ -1.7
HOXC12P31275 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC12P31275 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC12P31275 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXC12P31275 CTSL3P-202ENST00000412179 788 ntBASIC4.46□□□□□ -1.7
HOXC12P31275 RPL21P90-201ENST00000415692 466 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms