Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC103783.1-201ENST00000520506 373 ntBASIC2.16□□□□□ -2.06
CD40LGP29965 AP005902.1-201ENST00000521358 186 ntBASIC2.16□□□□□ -2.06
CD40LGP29965 COX6CP8-201ENST00000522620 226 ntBASIC2.16□□□□□ -2.06
CD40LGP29965 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CD40LGP29965 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.16□□□□□ -2.06
CD40LGP29965 AC090502.2-201ENST00000549267 280 ntBASIC2.16□□□□□ -2.06
CD40LGP29965 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.16□□□□□ -2.06
CD40LGP29965 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.16□□□□□ -2.06
CD40LGP29965 LARP7P2-201ENST00000575306 125 ntBASIC2.16□□□□□ -2.06
CD40LGP29965 MIR3200-201ENST00000580767 85 ntBASIC2.16□□□□□ -2.06
CD40LGP29965 HMGN2P15-201ENST00000585707 270 ntBASIC2.16□□□□□ -2.06
CD40LGP29965 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CD40LGP29965 AC092608.2-201ENST00000624427 218 ntBASIC2.16□□□□□ -2.06
CD40LGP29965 AC080188.3-201ENST00000624842 748 ntBASIC2.16□□□□□ -2.06
CD40LGP29965 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.16□□□□□ -2.06
CD40LGP29965 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CD40LGP29965 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.16□□□□□ -2.06
CD40LGP29965 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
CD40LGP29965 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
CD40LGP29965 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CD40LGP29965 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CD40LGP29965 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.16□□□□□ -2.06
CD40LGP29965 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
CD40LGP29965 FAM133CP-201ENST00000332869 704 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CD40LGP29965 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CD40LGP29965 RNU6-839P-201ENST00000363347 108 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 RNU6-217P-201ENST00000384164 104 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CD40LGP29965 AL138827.1-201ENST00000402666 306 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 HMGB1P17-201ENST00000403495 628 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 SNORD23.1-201ENST00000408212 104 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 RNA5SP21-201ENST00000410917 96 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 AC092634.6-201ENST00000418558 192 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 AC246680.2-201ENST00000422106 389 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 AC018630.2-202ENST00000422992 927 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.15□□□□□ -2.07
CD40LGP29965 TRIM60P13-201ENST00000432350 1283 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 AC105272.1-201ENST00000438604 198 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 AC107083.1-201ENST00000439643 279 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.15□□□□□ -2.07
CD40LGP29965 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.15□□□□□ -2.07
CD40LGP29965 AL353691.1-201ENST00000451332 387 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 MTATP6P7-201ENST00000453315 681 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.15□□□□□ -2.07
CD40LGP29965 MRPS17P3-201ENST00000465453 385 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 LARP1BP2-201ENST00000486594 519 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 GZMAP1-201ENST00000503054 631 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.15□□□□□ -2.07
CD40LGP29965 HIGD1AP13-201ENST00000509878 289 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 AC022447.1-201ENST00000515358 464 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.15□□□□□ -2.07
CD40LGP29965 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.15□□□□□ -2.07
CD40LGP29965 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.15□□□□□ -2.07
CD40LGP29965 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.15□□□□□ -2.07
CD40LGP29965 DUXAP11-201ENST00000603858 526 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 AL161729.4-201ENST00000604650 476 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 AL121917.1-203ENST00000605534 577 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 VN1R9P-201ENST00000614184 867 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 AL450472.3-201ENST00000615578 367 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 AL445493.3-201ENST00000619568 477 ntBASIC2.15□□□□□ -2.07
CD40LGP29965 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.15□□□□□ -2.07
CD40LGP29965 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CD40LGP29965 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CD40LGP29965 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CD40LGP29965 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CD40LGP29965 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.14□□□□□ -2.07
CD40LGP29965 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.14□□□□□ -2.07
CD40LGP29965 NPM1P11-201ENST00000417106 855 ntBASIC2.14□□□□□ -2.07
CD40LGP29965 CCDC58P2-201ENST00000417131 366 ntBASIC2.14□□□□□ -2.07
CD40LGP29965 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.14□□□□□ -2.07
CD40LGP29965 Z82210.1-201ENST00000440037 231 ntBASIC2.14□□□□□ -2.07
CD40LGP29965 AL831737.1-201ENST00000441288 271 ntBASIC2.14□□□□□ -2.07
CD40LGP29965 OR10R1P-201ENST00000441524 1141 ntBASIC2.14□□□□□ -2.07
CD40LGP29965 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.14□□□□□ -2.07
CD40LGP29965 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.14□□□□□ -2.07
CD40LGP29965 AL049874.1-201ENST00000489560 388 ntBASIC2.14□□□□□ -2.07
CD40LGP29965 AC080014.1-201ENST00000496877 1201 ntBASIC2.14□□□□□ -2.07
CD40LGP29965 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.14□□□□□ -2.07
CD40LGP29965 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.14□□□□□ -2.07
CD40LGP29965 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.14□□□□□ -2.07
CD40LGP29965 AP000889.2-201ENST00000532684 490 ntBASIC2.14□□□□□ -2.07
CD40LGP29965 AP000916.1-201ENST00000533869 835 ntBASIC2.14□□□□□ -2.07
CD40LGP29965 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.14□□□□□ -2.07
CD40LGP29965 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.14□□□□□ -2.07
CD40LGP29965 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.14□□□□□ -2.07
CD40LGP29965 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.14□□□□□ -2.07
CD40LGP29965 AC061975.8-201ENST00000587058 721 ntBASIC2.14□□□□□ -2.07
CD40LGP29965 AC068313.1-201ENST00000604028 1008 ntBASIC2.14□□□□□ -2.07
CD40LGP29965 AC007619.2-201ENST00000605743 379 ntBASIC2.14□□□□□ -2.07
CD40LGP29965 AC008498.1-201ENST00000613012 531 ntBASIC2.14□□□□□ -2.07
CD40LGP29965 AC006386.2-201ENST00000624491 75 ntBASIC2.14□□□□□ -2.07
CD40LGP29965 AC012005.1-201ENST00000624575 75 ntBASIC2.14□□□□□ -2.07
CD40LGP29965 AL590396.4-201ENST00000636779 956 ntBASIC2.14□□□□□ -2.07
CD40LGP29965 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
CD40LGP29965 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.14□□□□□ -2.07
CD40LGP29965 MTND4P1-201ENST00000457501 1466 ntBASIC2.14□□□□□ -2.07
CD40LGP29965 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CD40LGP29965 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms