Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VARSP26640 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VARSP26640 OR13C1P-202ENST00000641378 2919 ntBASIC5.62□□□□□ -1.51
VARSP26640 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
VARSP26640 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
VARSP26640 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
VARSP26640 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.61□□□□□ -1.51
VARSP26640 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
VARSP26640 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
VARSP26640 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VARSP26640 Y_RNA.534-201ENST00000384599 112 ntBASIC5.61□□□□□ -1.51
VARSP26640 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
VARSP26640 RNU6-821P-201ENST00000390995 107 ntBASIC5.61□□□□□ -1.51
VARSP26640 RNU4-78P-201ENST00000410940 126 ntBASIC5.61□□□□□ -1.51
VARSP26640 OR2AT2P-201ENST00000413438 905 ntBASIC5.61□□□□□ -1.51
VARSP26640 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.61□□□□□ -1.51
VARSP26640 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
VARSP26640 USP9YP7-201ENST00000436723 430 ntBASIC5.61□□□□□ -1.51
VARSP26640 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.61□□□□□ -1.51
VARSP26640 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.61□□□□□ -1.51
VARSP26640 USP9YP32-201ENST00000452432 430 ntBASIC5.61□□□□□ -1.51
VARSP26640 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC5.61□□□□□ -1.51
VARSP26640 U8.22-201ENST00000459141 133 ntBASIC5.61□□□□□ -1.51
VARSP26640 RNU1-88P-201ENST00000459274 128 ntBASIC5.61□□□□□ -1.51
VARSP26640 RPS15AP34-201ENST00000487776 387 ntBASIC5.61□□□□□ -1.51
VARSP26640 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
VARSP26640 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.61□□□□□ -1.51
VARSP26640 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.61□□□□□ -1.51
VARSP26640 MIR4659A-201ENST00000580269 81 ntBASIC5.61□□□□□ -1.51
VARSP26640 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.61□□□□□ -1.51
VARSP26640 SUMO2P15-201ENST00000604285 278 ntBASIC5.61□□□□□ -1.51
VARSP26640 RNA5SP440-201ENST00000612665 119 ntBASIC5.61□□□□□ -1.51
VARSP26640 RN7SL787P-201ENST00000613000 284 ntBASIC5.61□□□□□ -1.51
VARSP26640 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
VARSP26640 MIR6730-201ENST00000622213 67 ntBASIC5.61□□□□□ -1.51
VARSP26640 AC083843.3-201ENST00000623679 2186 ntBASIC5.61□□□□□ -1.51
VARSP26640 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
VARSP26640 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VARSP26640 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VARSP26640 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.61□□□□□ -1.51
VARSP26640 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
VARSP26640 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
VARSP26640 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.61□□□□□ -1.51
VARSP26640 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
VARSP26640 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.6□□□□□ -1.51
VARSP26640 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.6□□□□□ -1.51
VARSP26640 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
VARSP26640 AL138820.1-201ENST00000617901 5305 ntBASIC5.6□□□□□ -1.51
VARSP26640 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VARSP26640 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
VARSP26640 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
VARSP26640 MIR375-201ENST00000362103 64 ntBASIC5.6□□□□□ -1.51
VARSP26640 RNU6-37P-201ENST00000362692 107 ntBASIC5.6□□□□□ -1.51
VARSP26640 RNU6-11P-201ENST00000364234 107 ntBASIC5.6□□□□□ -1.51
VARSP26640 RNA5SP500-201ENST00000364486 119 ntBASIC5.6□□□□□ -1.51
VARSP26640 RNU6-7-201ENST00000364784 107 ntBASIC5.6□□□□□ -1.51
VARSP26640 RNU6-8-201ENST00000365467 107 ntBASIC5.6□□□□□ -1.51
VARSP26640 RNU6-25P-201ENST00000383873 107 ntBASIC5.6□□□□□ -1.51
VARSP26640 RNU6-1-201ENST00000383898 107 ntBASIC5.6□□□□□ -1.51
VARSP26640 RNU6-36P-201ENST00000384172 107 ntBASIC5.6□□□□□ -1.51
VARSP26640 RNU6-4P-201ENST00000384205 107 ntBASIC5.6□□□□□ -1.51
VARSP26640 RNU6-5P-201ENST00000384238 107 ntBASIC5.6□□□□□ -1.51
VARSP26640 RNU6-3P-201ENST00000384314 107 ntBASIC5.6□□□□□ -1.51
VARSP26640 RNU6-16P-201ENST00000384385 107 ntBASIC5.6□□□□□ -1.51
VARSP26640 RNU6-15P-201ENST00000384534 107 ntBASIC5.6□□□□□ -1.51
VARSP26640 RNU6-2-201ENST00000384627 107 ntBASIC5.6□□□□□ -1.51
VARSP26640 RNU6-29P-201ENST00000384637 107 ntBASIC5.6□□□□□ -1.51
VARSP26640 RNU6-9-201ENST00000384776 107 ntBASIC5.6□□□□□ -1.51
VARSP26640 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.6□□□□□ -1.51
VARSP26640 Y_RNA.590-201ENST00000410140 107 ntBASIC5.6□□□□□ -1.51
VARSP26640 RPL23AP36-201ENST00000413895 458 ntBASIC5.6□□□□□ -1.51
VARSP26640 MRPL53P1-201ENST00000414323 319 ntBASIC5.6□□□□□ -1.51
VARSP26640 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.6□□□□□ -1.51
VARSP26640 AL096701.2-201ENST00000416920 238 ntBASIC5.6□□□□□ -1.51
VARSP26640 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.6□□□□□ -1.51
VARSP26640 AC090774.1-201ENST00000435925 246 ntBASIC5.6□□□□□ -1.51
VARSP26640 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.6□□□□□ -1.51
VARSP26640 MRPL48P1-201ENST00000445390 636 ntBASIC5.6□□□□□ -1.51
VARSP26640 AL589765.3-201ENST00000446084 462 ntBASIC5.6□□□□□ -1.51
VARSP26640 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.6□□□□□ -1.51
VARSP26640 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.6□□□□□ -1.51
VARSP26640 AC034236.1-201ENST00000469891 373 ntBASIC5.6□□□□□ -1.51
VARSP26640 AC023424.1-201ENST00000496058 459 ntBASIC5.6□□□□□ -1.51
VARSP26640 MIR892C-201ENST00000516410 77 ntBASIC5.6□□□□□ -1.51
VARSP26640 RNU6-1012P-201ENST00000516606 109 ntBASIC5.6□□□□□ -1.51
VARSP26640 MIR2355-201ENST00000517199 87 ntBASIC5.6□□□□□ -1.51
VARSP26640 RNU6-840P-201ENST00000517275 65 ntBASIC5.6□□□□□ -1.51
VARSP26640 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.6□□□□□ -1.51
VARSP26640 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.6□□□□□ -1.51
VARSP26640 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.6□□□□□ -1.51
VARSP26640 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.6□□□□□ -1.51
VARSP26640 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.6□□□□□ -1.51
VARSP26640 AC009962.1-201ENST00000567327 3813 ntBASIC5.6□□□□□ -1.51
VARSP26640 AC010547.6-201ENST00000571789 193 ntBASIC5.6□□□□□ -1.51
VARSP26640 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.6□□□□□ -1.51
VARSP26640 OR7E18P-201ENST00000592589 702 ntBASIC5.6□□□□□ -1.51
VARSP26640 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.6□□□□□ -1.51
VARSP26640 RNU6-6P-201ENST00000606623 107 ntBASIC5.6□□□□□ -1.51
VARSP26640 AC211433.2-201ENST00000608433 387 ntBASIC5.6□□□□□ -1.51
VARSP26640 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms