Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AL138960.2-201ENST00000625145 535 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
COL11A1P12107 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
COL11A1P12107 SNORA51.11-201ENST00000384442 131 ntBASIC1.97□□□□□ -2.09
COL11A1P12107 MIR499A-201ENST00000384903 122 ntBASIC1.97□□□□□ -2.09
COL11A1P12107 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
COL11A1P12107 RPL23AP47-201ENST00000408017 460 ntBASIC1.97□□□□□ -2.09
COL11A1P12107 BTF3P4-201ENST00000418852 495 ntBASIC1.97□□□□□ -2.09
COL11A1P12107 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.97□□□□□ -2.09
COL11A1P12107 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.97□□□□□ -2.09
COL11A1P12107 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.97□□□□□ -2.09
COL11A1P12107 RPS15AP7-201ENST00000439294 405 ntBASIC1.97□□□□□ -2.09
COL11A1P12107 AC007000.2-201ENST00000442564 487 ntBASIC1.97□□□□□ -2.09
COL11A1P12107 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.97□□□□□ -2.09
COL11A1P12107 HMGN2P16-201ENST00000456802 261 ntBASIC1.97□□□□□ -2.09
COL11A1P12107 NF1P3-201ENST00000457709 450 ntBASIC1.97□□□□□ -2.09
COL11A1P12107 RPL21P39-201ENST00000463605 483 ntBASIC1.97□□□□□ -2.09
COL11A1P12107 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.97□□□□□ -2.09
COL11A1P12107 AC004923.2-201ENST00000529649 369 ntBASIC1.97□□□□□ -2.09
COL11A1P12107 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.97□□□□□ -2.09
COL11A1P12107 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.97□□□□□ -2.09
COL11A1P12107 AC104229.1-201ENST00000561364 255 ntBASIC1.97□□□□□ -2.09
COL11A1P12107 AC107954.1-201ENST00000565906 727 ntBASIC1.97□□□□□ -2.09
COL11A1P12107 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.97□□□□□ -2.09
COL11A1P12107 MIR4446-201ENST00000578505 67 ntBASIC1.97□□□□□ -2.09
COL11A1P12107 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
COL11A1P12107 AL035411.2-201ENST00000604022 421 ntBASIC1.97□□□□□ -2.09
COL11A1P12107 AL158211.2-201ENST00000607282 395 ntBASIC1.97□□□□□ -2.09
COL11A1P12107 AL138880.2-201ENST00000616214 239 ntBASIC1.97□□□□□ -2.09
COL11A1P12107 AC090617.7-201ENST00000623952 126 ntBASIC1.97□□□□□ -2.09
COL11A1P12107 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
COL11A1P12107 AC002546.1-201ENST00000588041 2504 ntBASIC1.97□□□□□ -2.09
COL11A1P12107 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
COL11A1P12107 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
COL11A1P12107 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
COL11A1P12107 AL121972.1-201ENST00000402023 252 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 ARL2BPP3-201ENST00000421226 480 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.96□□□□□ -2.1
COL11A1P12107 FO393419.3-201ENST00000428741 282 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.96□□□□□ -2.1
COL11A1P12107 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
COL11A1P12107 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.96□□□□□ -2.1
COL11A1P12107 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.96□□□□□ -2.1
COL11A1P12107 TPTE2P6-202ENST00000445572 1007 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC1.96□□□□□ -2.1
COL11A1P12107 Z99714.1-201ENST00000450463 807 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 SSXP4-201ENST00000451349 245 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 BX322784.1-201ENST00000455793 1077 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 AMD1P1-201ENST00000457220 922 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 RNU7-95P-201ENST00000459222 64 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 ARL4AP2-201ENST00000507378 601 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.96□□□□□ -2.1
COL11A1P12107 AC093770.1-201ENST00000511559 571 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 RNU6-1102P-201ENST00000516149 96 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.96□□□□□ -2.1
COL11A1P12107 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.96□□□□□ -2.1
COL11A1P12107 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.96□□□□□ -2.1
COL11A1P12107 AL163153.1-201ENST00000554223 283 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 DNAJC8P1-201ENST00000554535 372 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 AP001029.3-201ENST00000588063 596 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 AC020895.1-201ENST00000595362 272 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 AC079610.2-201ENST00000604818 690 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 MIR8081-201ENST00000611533 95 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
COL11A1P12107 RNU6-50P-201ENST00000362356 103 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
COL11A1P12107 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
COL11A1P12107 FGF7P8-201ENST00000402994 292 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
COL11A1P12107 AL445183.3-201ENST00000414168 502 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 AP000949.1-201ENST00000438328 629 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 AL031659.1-201ENST00000447075 539 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
COL11A1P12107 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.96□□□□□ -2.1
COL11A1P12107 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.96□□□□□ -2.1
COL11A1P12107 RPL21P47-201ENST00000483696 477 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 MTCYBP17-201ENST00000503579 789 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 AC004062.1-201ENST00000509926 645 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 AC117532.1-201ENST00000514638 323 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.96□□□□□ -2.1
COL11A1P12107 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
COL11A1P12107 MTND1P36-201ENST00000522384 936 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.96□□□□□ -2.1
COL11A1P12107 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.96□□□□□ -2.1
COL11A1P12107 AC010546.1-201ENST00000569391 485 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 AC013444.2-201ENST00000603317 787 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 MIR502-201ENST00000606349 86 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 AL136370.1-201ENST00000608166 691 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.96□□□□□ -2.1
COL11A1P12107 AC092574.1-201ENST00000609771 420 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.96□□□□□ -2.1
COL11A1P12107 AC073569.3-201ENST00000619055 682 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
COL11A1P12107 FO624990.1-201ENST00000636373 85 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 AC083865.1-201ENST00000636634 831 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.96□□□□□ -2.1
COL11A1P12107 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
COL11A1P12107 AC131280.1-202ENST00000624067 4211 ntBASIC1.95□□□□□ -2.1
COL11A1P12107 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms