Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC083806.3-201ENST00000614016 455 ntBASIC2.12□□□□□ -2.07
TOP2AP11388 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
TOP2AP11388 AP002907.1-201ENST00000606361 1430 ntBASIC2.11□□□□□ -2.07
TOP2AP11388 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TOP2AP11388 RNY1-201ENST00000364228 113 ntBASIC2.11□□□□□ -2.07
TOP2AP11388 RNU6-1-201ENST00000383898 107 ntBASIC2.11□□□□□ -2.07
TOP2AP11388 RNU6-42P-201ENST00000384165 107 ntBASIC2.11□□□□□ -2.07
TOP2AP11388 RNU6-36P-201ENST00000384172 107 ntBASIC2.11□□□□□ -2.07
TOP2AP11388 RNU6-4P-201ENST00000384205 107 ntBASIC2.11□□□□□ -2.07
TOP2AP11388 RNU6-5P-201ENST00000384238 107 ntBASIC2.11□□□□□ -2.07
TOP2AP11388 RNU6-3P-201ENST00000384314 107 ntBASIC2.11□□□□□ -2.07
TOP2AP11388 RNU6-2-201ENST00000384627 107 ntBASIC2.11□□□□□ -2.07
TOP2AP11388 RNU6-9-201ENST00000384776 107 ntBASIC2.11□□□□□ -2.07
TOP2AP11388 RNU6-33P-201ENST00000384793 107 ntBASIC2.11□□□□□ -2.07
TOP2AP11388 AC074117.2-201ENST00000417130 397 ntBASIC2.11□□□□□ -2.07
TOP2AP11388 RPS3AP44-201ENST00000425466 790 ntBASIC2.11□□□□□ -2.07
TOP2AP11388 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TOP2AP11388 RPS29P1-201ENST00000465274 159 ntBASIC2.11□□□□□ -2.07
TOP2AP11388 AC023790.1-201ENST00000482174 347 ntBASIC2.11□□□□□ -2.07
TOP2AP11388 MRPL42P6-201ENST00000486397 371 ntBASIC2.11□□□□□ -2.07
TOP2AP11388 AC022493.1-201ENST00000492984 337 ntBASIC2.11□□□□□ -2.07
TOP2AP11388 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.11□□□□□ -2.07
TOP2AP11388 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.11□□□□□ -2.07
TOP2AP11388 AP000907.2-201ENST00000530827 353 ntBASIC2.11□□□□□ -2.07
TOP2AP11388 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.11□□□□□ -2.07
TOP2AP11388 RNU6-6P-201ENST00000606623 107 ntBASIC2.11□□□□□ -2.07
TOP2AP11388 AC079597.1-201ENST00000624306 508 ntBASIC2.11□□□□□ -2.07
TOP2AP11388 AL161722.3-201ENST00000605789 2983 ntBASIC2.1□□□□□ -2.07
TOP2AP11388 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.1□□□□□ -2.07
TOP2AP11388 U3.40-201ENST00000408706 208 ntBASIC2.1□□□□□ -2.07
TOP2AP11388 RNU2-40P-201ENST00000410833 196 ntBASIC2.1□□□□□ -2.07
TOP2AP11388 SRIP3-201ENST00000413200 219 ntBASIC2.1□□□□□ -2.07
TOP2AP11388 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC2.1□□□□□ -2.07
TOP2AP11388 AC092902.1-201ENST00000486999 259 ntBASIC2.1□□□□□ -2.07
TOP2AP11388 MTCYBP35-201ENST00000503630 1137 ntBASIC2.1□□□□□ -2.07
TOP2AP11388 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.1□□□□□ -2.07
TOP2AP11388 MIR6788-201ENST00000618842 66 ntBASIC2.1□□□□□ -2.07
TOP2AP11388 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
TOP2AP11388 RPL26P37-201ENST00000411983 438 ntBASIC2.09□□□□□ -2.07
TOP2AP11388 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.09□□□□□ -2.07
TOP2AP11388 IPO7P1-201ENST00000442031 636 ntBASIC2.09□□□□□ -2.07
TOP2AP11388 AL121871.1-201ENST00000443413 436 ntBASIC2.09□□□□□ -2.07
TOP2AP11388 AC022634.1-201ENST00000520765 532 ntBASIC2.09□□□□□ -2.07
TOP2AP11388 AC109446.2-201ENST00000567872 497 ntBASIC2.09□□□□□ -2.07
TOP2AP11388 MIR4512-201ENST00000583257 77 ntBASIC2.09□□□□□ -2.07
TOP2AP11388 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.09□□□□□ -2.07
TOP2AP11388 MKKS-204ENST00000639674 192 ntBASIC2.09□□□□□ -2.07
TOP2AP11388 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.09□□□□□ -2.07
TOP2AP11388 CDC27P3-201ENST00000635418 1910 ntBASIC2.09□□□□□ -2.08
TOP2AP11388 AL136520.1-201ENST00000600311 1322 ntBASIC2.08□□□□□ -2.08
TOP2AP11388 ZNF734P-201ENST00000419494 1534 ntBASIC2.08□□□□□ -2.08
TOP2AP11388 RNU4-91P-201ENST00000364778 135 ntBASIC2.08□□□□□ -2.08
TOP2AP11388 MIR520E-201ENST00000384867 87 ntBASIC2.08□□□□□ -2.08
TOP2AP11388 VN1R108P-201ENST00000431580 830 ntBASIC2.08□□□□□ -2.08
TOP2AP11388 ATP5J2P3-201ENST00000451550 258 ntBASIC2.08□□□□□ -2.08
TOP2AP11388 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.08□□□□□ -2.08
TOP2AP11388 SYF2P1-201ENST00000550658 413 ntBASIC2.08□□□□□ -2.08
TOP2AP11388 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
TOP2AP11388 AC090953.1-201ENST00000604305 1092 ntBASIC2.08□□□□□ -2.08
TOP2AP11388 AC097468.3-201ENST00000607956 456 ntBASIC2.08□□□□□ -2.08
TOP2AP11388 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.08□□□□□ -2.08
TOP2AP11388 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.08□□□□□ -2.08
TOP2AP11388 Z75741.2-201ENST00000417272 1167 ntBASIC2.07□□□□□ -2.08
TOP2AP11388 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.07□□□□□ -2.08
TOP2AP11388 CLIC4P1-201ENST00000453177 535 ntBASIC2.07□□□□□ -2.08
TOP2AP11388 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.07□□□□□ -2.08
TOP2AP11388 RN7SKP234-201ENST00000517173 224 ntBASIC2.07□□□□□ -2.08
TOP2AP11388 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.07□□□□□ -2.08
TOP2AP11388 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.07□□□□□ -2.08
TOP2AP11388 GLUD1P4-201ENST00000590914 418 ntBASIC2.07□□□□□ -2.08
TOP2AP11388 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.07□□□□□ -2.08
TOP2AP11388 AP000676.4-201ENST00000624659 623 ntBASIC2.07□□□□□ -2.08
TOP2AP11388 CENPCP1-201ENST00000533085 2578 ntBASIC2.07□□□□□ -2.08
TOP2AP11388 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
TOP2AP11388 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
TOP2AP11388 RN7SKP51-201ENST00000410781 304 ntBASIC2.07□□□□□ -2.08
TOP2AP11388 IFNA20P-201ENST00000436840 528 ntBASIC2.07□□□□□ -2.08
TOP2AP11388 BMI1P1-201ENST00000445879 941 ntBASIC2.07□□□□□ -2.08
TOP2AP11388 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.07□□□□□ -2.08
TOP2AP11388 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TOP2AP11388 RNU6-1223P-201ENST00000517124 104 ntBASIC2.07□□□□□ -2.08
TOP2AP11388 AC125611.2-201ENST00000551907 647 ntBASIC2.07□□□□□ -2.08
TOP2AP11388 FAM106DP-201ENST00000586416 501 ntBASIC2.07□□□□□ -2.08
TOP2AP11388 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.07□□□□□ -2.08
TOP2AP11388 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.06□□□□□ -2.08
TOP2AP11388 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
TOP2AP11388 RNA5SP325-201ENST00000363756 130 ntBASIC2.06□□□□□ -2.08
TOP2AP11388 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
TOP2AP11388 AL136380.1-201ENST00000447970 162 ntBASIC2.06□□□□□ -2.08
TOP2AP11388 RPL7P18-201ENST00000478965 734 ntBASIC2.06□□□□□ -2.08
TOP2AP11388 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.06□□□□□ -2.08
TOP2AP11388 AL589935.2-201ENST00000616471 1231 ntBASIC2.06□□□□□ -2.08
TOP2AP11388 MIR6515-201ENST00000619843 57 ntBASIC2.06□□□□□ -2.08
TOP2AP11388 AL359851.1-201ENST00000569460 4997 ntBASIC2.05□□□□□ -2.08
TOP2AP11388 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TOP2AP11388 AL356057.2-201ENST00000403318 432 ntBASIC2.05□□□□□ -2.08
TOP2AP11388 MTCYBP7-201ENST00000419540 1134 ntBASIC2.05□□□□□ -2.08
TOP2AP11388 snoU13.3-201ENST00000459441 104 ntBASIC2.05□□□□□ -2.08
TOP2AP11388 SUMO2P6-201ENST00000505273 288 ntBASIC2.05□□□□□ -2.08
TOP2AP11388 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms