Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.43□□□□□ -2.02
THRAP10827 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.43□□□□□ -2.02
THRAP10827 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.43□□□□□ -2.02
THRAP10827 AC122134.1-202ENST00000569111 1201 ntBASIC2.43□□□□□ -2.02
THRAP10827 MIR3124-201ENST00000582636 67 ntBASIC2.43□□□□□ -2.02
THRAP10827 DNAJC19P3-201ENST00000594491 331 ntBASIC2.43□□□□□ -2.02
THRAP10827 AL645944.1-201ENST00000603857 493 ntBASIC2.43□□□□□ -2.02
THRAP10827 AL583856.2-201ENST00000606298 543 ntBASIC2.43□□□□□ -2.02
THRAP10827 AC008568.2-201ENST00000623862 2313 ntBASIC2.43□□□□□ -2.02
THRAP10827 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
THRAP10827 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
THRAP10827 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
THRAP10827 Y_RNA.25-201ENST00000362528 102 ntBASIC2.42□□□□□ -2.02
THRAP10827 RNU5B-4P-201ENST00000363508 111 ntBASIC2.42□□□□□ -2.02
THRAP10827 RNA5SP456-201ENST00000364002 114 ntBASIC2.42□□□□□ -2.02
THRAP10827 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.42□□□□□ -2.02
THRAP10827 RPS4XP7-201ENST00000406274 780 ntBASIC2.42□□□□□ -2.02
THRAP10827 MIR1290-201ENST00000408735 78 ntBASIC2.42□□□□□ -2.02
THRAP10827 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.42□□□□□ -2.02
THRAP10827 AC019178.2-201ENST00000423595 505 ntBASIC2.42□□□□□ -2.02
THRAP10827 AC234781.2-201ENST00000426370 994 ntBASIC2.42□□□□□ -2.02
THRAP10827 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.42□□□□□ -2.02
THRAP10827 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.42□□□□□ -2.02
THRAP10827 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.42□□□□□ -2.02
THRAP10827 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
THRAP10827 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.42□□□□□ -2.02
THRAP10827 NAMPTP2-201ENST00000505629 1115 ntBASIC2.42□□□□□ -2.02
THRAP10827 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
THRAP10827 AL359273.1-201ENST00000510918 627 ntBASIC2.42□□□□□ -2.02
THRAP10827 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.42□□□□□ -2.02
THRAP10827 MTCO3P27-201ENST00000514397 196 ntBASIC2.42□□□□□ -2.02
THRAP10827 RNU1-41P-201ENST00000516161 162 ntBASIC2.42□□□□□ -2.02
THRAP10827 RNU1-48P-201ENST00000516400 162 ntBASIC2.42□□□□□ -2.02
THRAP10827 RN7SKP40-201ENST00000517211 242 ntBASIC2.42□□□□□ -2.02
THRAP10827 AP003355.1-201ENST00000518956 587 ntBASIC2.42□□□□□ -2.02
THRAP10827 AC104417.1-201ENST00000523974 751 ntBASIC2.42□□□□□ -2.02
THRAP10827 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.42□□□□□ -2.02
THRAP10827 AC125611.1-201ENST00000549563 229 ntBASIC2.42□□□□□ -2.02
THRAP10827 PRELID2P1-201ENST00000552837 301 ntBASIC2.42□□□□□ -2.02
THRAP10827 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.42□□□□□ -2.02
THRAP10827 AC009163.5-201ENST00000575421 637 ntBASIC2.42□□□□□ -2.02
THRAP10827 MIR3609-201ENST00000582661 80 ntBASIC2.42□□□□□ -2.02
THRAP10827 AC120053.1-201ENST00000607706 736 ntBASIC2.42□□□□□ -2.02
THRAP10827 AP000254.1-201ENST00000609934 520 ntBASIC2.42□□□□□ -2.02
THRAP10827 TUG1_1.1-201ENST00000610654 145 ntBASIC2.42□□□□□ -2.02
THRAP10827 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.42□□□□□ -2.02
THRAP10827 AC027309.3-201ENST00000623419 351 ntBASIC2.42□□□□□ -2.02
THRAP10827 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.41□□□□□ -2.02
THRAP10827 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
THRAP10827 Z99496.1-201ENST00000469424 1477 ntBASIC2.41□□□□□ -2.02
THRAP10827 RNA5SP289-201ENST00000362332 137 ntBASIC2.41□□□□□ -2.02
THRAP10827 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
THRAP10827 RNU6-1197P-201ENST00000391183 107 ntBASIC2.41□□□□□ -2.02
THRAP10827 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
THRAP10827 MIR1261-201ENST00000408659 82 ntBASIC2.41□□□□□ -2.02
THRAP10827 RNU2-43P-201ENST00000410306 190 ntBASIC2.41□□□□□ -2.02
THRAP10827 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.41□□□□□ -2.02
THRAP10827 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.41□□□□□ -2.02
THRAP10827 RPL7P37-201ENST00000425095 738 ntBASIC2.41□□□□□ -2.02
THRAP10827 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
THRAP10827 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.41□□□□□ -2.02
THRAP10827 MTND2P5-201ENST00000432656 1006 ntBASIC2.41□□□□□ -2.02
THRAP10827 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.41□□□□□ -2.02
THRAP10827 AC024082.2-201ENST00000434771 238 ntBASIC2.41□□□□□ -2.02
THRAP10827 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.41□□□□□ -2.02
THRAP10827 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.41□□□□□ -2.02
THRAP10827 AL592447.1-201ENST00000447592 540 ntBASIC2.41□□□□□ -2.02
THRAP10827 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
THRAP10827 AL049714.1-201ENST00000466686 347 ntBASIC2.41□□□□□ -2.02
THRAP10827 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.41□□□□□ -2.02
THRAP10827 AC093801.2-201ENST00000503966 1050 ntBASIC2.41□□□□□ -2.02
THRAP10827 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.41□□□□□ -2.02
THRAP10827 AP003467.2-201ENST00000520175 319 ntBASIC2.41□□□□□ -2.02
THRAP10827 MTCO3P15-201ENST00000526563 574 ntBASIC2.41□□□□□ -2.02
THRAP10827 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
THRAP10827 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.41□□□□□ -2.02
THRAP10827 AP000867.2-201ENST00000532468 320 ntBASIC2.41□□□□□ -2.02
THRAP10827 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.41□□□□□ -2.02
THRAP10827 AC136601.2-201ENST00000604356 474 ntBASIC2.41□□□□□ -2.02
THRAP10827 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.41□□□□□ -2.02
THRAP10827 AC084824.5-201ENST00000612009 413 ntBASIC2.41□□□□□ -2.02
THRAP10827 AC087241.4-201ENST00000612441 480 ntBASIC2.41□□□□□ -2.02
THRAP10827 AC010975.3-201ENST00000618727 978 ntBASIC2.41□□□□□ -2.02
THRAP10827 AC011330.2-201ENST00000621680 635 ntBASIC2.41□□□□□ -2.02
THRAP10827 AC004009.2-201ENST00000623016 728 ntBASIC2.41□□□□□ -2.02
THRAP10827 AC010872.1-201ENST00000624225 675 ntBASIC2.41□□□□□ -2.02
THRAP10827 MKKS-204ENST00000639674 192 ntBASIC2.41□□□□□ -2.02
THRAP10827 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
THRAP10827 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
THRAP10827 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.41□□□□□ -2.02
THRAP10827 AC005336.3-201ENST00000623833 2679 ntBASIC2.41□□□□□ -2.02
THRAP10827 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.41□□□□□ -2.02
THRAP10827 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.4□□□□□ -2.02
THRAP10827 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
THRAP10827 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
THRAP10827 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
THRAP10827 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
THRAP10827 RNU6-707P-201ENST00000364647 95 ntBASIC2.4□□□□□ -2.03
THRAP10827 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
THRAP10827 SNORA41-201ENST00000384675 132 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms