Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 FRG1BP-201ENST00000278882 761 ntBASIC4.51□□□□□ -1.69
SNRPA1P09661 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SNRPA1P09661 FRG1CP-201ENST00000358464 769 ntBASIC4.51□□□□□ -1.69
SNRPA1P09661 Y_RNA.234-201ENST00000364409 97 ntBASIC4.51□□□□□ -1.69
SNRPA1P09661 Y_RNA.381-201ENST00000365666 102 ntBASIC4.51□□□□□ -1.69
SNRPA1P09661 MTND4LP20-201ENST00000402379 270 ntBASIC4.51□□□□□ -1.69
SNRPA1P09661 HSPE1P8-201ENST00000406997 288 ntBASIC4.51□□□□□ -1.69
SNRPA1P09661 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.51□□□□□ -1.69
SNRPA1P09661 RPS15AP40-201ENST00000419621 391 ntBASIC4.51□□□□□ -1.69
SNRPA1P09661 AL049734.2-201ENST00000441066 616 ntBASIC4.51□□□□□ -1.69
SNRPA1P09661 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.51□□□□□ -1.69
SNRPA1P09661 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.51□□□□□ -1.69
SNRPA1P09661 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.51□□□□□ -1.69
SNRPA1P09661 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.51□□□□□ -1.69
SNRPA1P09661 RN7SL807P-201ENST00000470923 297 ntBASIC4.51□□□□□ -1.69
SNRPA1P09661 RPS26P15-201ENST00000488067 348 ntBASIC4.51□□□□□ -1.69
SNRPA1P09661 AC093663.1-201ENST00000497190 394 ntBASIC4.51□□□□□ -1.69
SNRPA1P09661 RNF138P1-201ENST00000502765 546 ntBASIC4.51□□□□□ -1.69
SNRPA1P09661 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.51□□□□□ -1.69
SNRPA1P09661 AC025465.4-201ENST00000513422 638 ntBASIC4.51□□□□□ -1.69
SNRPA1P09661 RNU6-1281P-201ENST00000516223 105 ntBASIC4.51□□□□□ -1.69
SNRPA1P09661 IGKV2-26-201ENST00000518305 343 ntBASIC4.51□□□□□ -1.69
SNRPA1P09661 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SNRPA1P09661 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SNRPA1P09661 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.51□□□□□ -1.69
SNRPA1P09661 AL512310.1-201ENST00000548639 172 ntBASIC4.51□□□□□ -1.69
SNRPA1P09661 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.51□□□□□ -1.69
SNRPA1P09661 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.51□□□□□ -1.69
SNRPA1P09661 AC037471.2-201ENST00000564941 598 ntBASIC4.51□□□□□ -1.69
SNRPA1P09661 AL356432.3-201ENST00000568952 465 ntBASIC4.51□□□□□ -1.69
SNRPA1P09661 MIR3167-201ENST00000579623 85 ntBASIC4.51□□□□□ -1.69
SNRPA1P09661 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.51□□□□□ -1.69
SNRPA1P09661 KLKP1-201ENST00000595979 403 ntBASIC4.51□□□□□ -1.69
SNRPA1P09661 BNIP3P9-201ENST00000603714 553 ntBASIC4.51□□□□□ -1.69
SNRPA1P09661 AC104260.1-201ENST00000616660 539 ntBASIC4.51□□□□□ -1.69
SNRPA1P09661 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.51□□□□□ -1.69
SNRPA1P09661 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.51□□□□□ -1.69
SNRPA1P09661 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SNRPA1P09661 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SNRPA1P09661 AL354685.2-201ENST00000448218 1447 ntBASIC4.51□□□□□ -1.69
SNRPA1P09661 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.51□□□□□ -1.69
SNRPA1P09661 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.51□□□□□ -1.69
SNRPA1P09661 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SNRPA1P09661 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SNRPA1P09661 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.51□□□□□ -1.69
SNRPA1P09661 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.51□□□□□ -1.69
SNRPA1P09661 MAPK10-373ENST00000641983 6772 ntBASIC4.51□□□□□ -1.69
SNRPA1P09661 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNRPA1P09661 MTND5P33-201ENST00000571250 1450 ntBASIC4.5□□□□□ -1.69
SNRPA1P09661 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNRPA1P09661 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNRPA1P09661 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNRPA1P09661 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.5□□□□□ -1.69
SNRPA1P09661 RNU4-1-201ENST00000363925 141 ntBASIC4.5□□□□□ -1.69
SNRPA1P09661 RNY4P16-201ENST00000364768 94 ntBASIC4.5□□□□□ -1.69
SNRPA1P09661 AL133412.1-201ENST00000380194 2992 ntBASIC4.5□□□□□ -1.69
SNRPA1P09661 AL603766.1-201ENST00000407763 664 ntBASIC4.5□□□□□ -1.69
SNRPA1P09661 U3.39-201ENST00000408569 239 ntBASIC4.5□□□□□ -1.69
SNRPA1P09661 RN7SKP111-201ENST00000410349 271 ntBASIC4.5□□□□□ -1.69
SNRPA1P09661 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.5□□□□□ -1.69
SNRPA1P09661 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.5□□□□□ -1.69
SNRPA1P09661 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.5□□□□□ -1.69
SNRPA1P09661 AC091390.3-201ENST00000426478 338 ntBASIC4.5□□□□□ -1.69
SNRPA1P09661 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.5□□□□□ -1.69
SNRPA1P09661 AC017083.1-201ENST00000428093 483 ntBASIC4.5□□□□□ -1.69
SNRPA1P09661 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.5□□□□□ -1.69
SNRPA1P09661 USP9YP8-201ENST00000441913 500 ntBASIC4.5□□□□□ -1.69
SNRPA1P09661 RPL23AP20-201ENST00000447965 421 ntBASIC4.5□□□□□ -1.69
SNRPA1P09661 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.5□□□□□ -1.69
SNRPA1P09661 AL645939.1-201ENST00000453429 797 ntBASIC4.5□□□□□ -1.69
SNRPA1P09661 snoU13.8-201ENST00000458890 104 ntBASIC4.5□□□□□ -1.69
SNRPA1P09661 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.5□□□□□ -1.69
SNRPA1P09661 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SNRPA1P09661 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.5□□□□□ -1.69
SNRPA1P09661 RNU6-1220P-201ENST00000517126 108 ntBASIC4.5□□□□□ -1.69
SNRPA1P09661 HMGB1P19-201ENST00000517578 577 ntBASIC4.5□□□□□ -1.69
SNRPA1P09661 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.5□□□□□ -1.69
SNRPA1P09661 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.5□□□□□ -1.69
SNRPA1P09661 AP000907.2-201ENST00000530827 353 ntBASIC4.5□□□□□ -1.69
SNRPA1P09661 AP003034.1-201ENST00000534621 422 ntBASIC4.5□□□□□ -1.69
SNRPA1P09661 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SNRPA1P09661 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.5□□□□□ -1.69
SNRPA1P09661 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.5□□□□□ -1.69
SNRPA1P09661 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.5□□□□□ -1.69
SNRPA1P09661 AC060780.3-201ENST00000589464 80 ntBASIC4.5□□□□□ -1.69
SNRPA1P09661 AC008638.3-201ENST00000603341 463 ntBASIC4.5□□□□□ -1.69
SNRPA1P09661 AC010680.4-201ENST00000605334 543 ntBASIC4.5□□□□□ -1.69
SNRPA1P09661 AC093788.1-201ENST00000609356 927 ntBASIC4.5□□□□□ -1.69
SNRPA1P09661 AC012150.2-201ENST00000621300 544 ntBASIC4.5□□□□□ -1.69
SNRPA1P09661 MIR3662-201ENST00000637030 95 ntBASIC4.5□□□□□ -1.69
SNRPA1P09661 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SNRPA1P09661 MTND4P12-201ENST00000498999 1377 ntBASIC4.5□□□□□ -1.69
SNRPA1P09661 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNRPA1P09661 AL133383.2-201ENST00000622958 2336 ntBASIC4.5□□□□□ -1.69
SNRPA1P09661 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.5□□□□□ -1.69
SNRPA1P09661 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SNRPA1P09661 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SNRPA1P09661 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.49□□□□□ -1.69
SNRPA1P09661 PNPT1P2-201ENST00000456768 2050 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms