Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC008427.1-201ENST00000503102 655 ntBASIC2.51□□□□□ -2.01
TPM1P09493 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.51□□□□□ -2.01
TPM1P09493 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.51□□□□□ -2.01
TPM1P09493 RNU6-1256P-201ENST00000516539 103 ntBASIC2.51□□□□□ -2.01
TPM1P09493 SCARNA11.3-201ENST00000517276 130 ntBASIC2.51□□□□□ -2.01
TPM1P09493 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.51□□□□□ -2.01
TPM1P09493 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.51□□□□□ -2.01
TPM1P09493 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.51□□□□□ -2.01
TPM1P09493 AL391261.3-201ENST00000557194 520 ntBASIC2.51□□□□□ -2.01
TPM1P09493 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.51□□□□□ -2.01
TPM1P09493 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.51□□□□□ -2.01
TPM1P09493 SNORD53-201ENST00000579969 78 ntBASIC2.51□□□□□ -2.01
TPM1P09493 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.51□□□□□ -2.01
TPM1P09493 AL450472.3-201ENST00000615578 367 ntBASIC2.51□□□□□ -2.01
TPM1P09493 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.51□□□□□ -2.01
TPM1P09493 MIR6766-201ENST00000622641 72 ntBASIC2.51□□□□□ -2.01
TPM1P09493 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
TPM1P09493 AC005832.2-201ENST00000538921 1430 ntBASIC2.51□□□□□ -2.01
TPM1P09493 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TPM1P09493 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
TPM1P09493 GNG5P1-201ENST00000255500 204 ntBASIC2.5□□□□□ -2.01
TPM1P09493 OR5J1P-201ENST00000313544 939 ntBASIC2.5□□□□□ -2.01
TPM1P09493 AL596028.1-201ENST00000326971 197 ntBASIC2.5□□□□□ -2.01
TPM1P09493 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.5□□□□□ -2.01
TPM1P09493 SNORD46.1-201ENST00000364139 104 ntBASIC2.5□□□□□ -2.01
TPM1P09493 RNU6-7-201ENST00000364784 107 ntBASIC2.5□□□□□ -2.01
TPM1P09493 RNU6-8-201ENST00000365467 107 ntBASIC2.5□□□□□ -2.01
TPM1P09493 MIR518C-201ENST00000384822 101 ntBASIC2.5□□□□□ -2.01
TPM1P09493 MIR23B-201ENST00000384832 97 ntBASIC2.5□□□□□ -2.01
TPM1P09493 RNU6-932P-201ENST00000391108 106 ntBASIC2.5□□□□□ -2.01
TPM1P09493 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TPM1P09493 RN7SKP140-201ENST00000411196 284 ntBASIC2.5□□□□□ -2.01
TPM1P09493 RNU6-575P-201ENST00000411326 105 ntBASIC2.5□□□□□ -2.01
TPM1P09493 AC019178.2-201ENST00000423595 505 ntBASIC2.5□□□□□ -2.01
TPM1P09493 HMGN2P38-201ENST00000423806 265 ntBASIC2.5□□□□□ -2.01
TPM1P09493 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.5□□□□□ -2.01
TPM1P09493 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TPM1P09493 AL049734.2-201ENST00000441066 616 ntBASIC2.5□□□□□ -2.01
TPM1P09493 RPL7P55-201ENST00000450522 746 ntBASIC2.5□□□□□ -2.01
TPM1P09493 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.5□□□□□ -2.01
TPM1P09493 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.5□□□□□ -2.01
TPM1P09493 AL049874.1-201ENST00000489560 388 ntBASIC2.5□□□□□ -2.01
TPM1P09493 GTF2IP9-201ENST00000502460 301 ntBASIC2.5□□□□□ -2.01
TPM1P09493 AC010468.3-201ENST00000508225 458 ntBASIC2.5□□□□□ -2.01
TPM1P09493 AC026801.2-201ENST00000515352 425 ntBASIC2.5□□□□□ -2.01
TPM1P09493 SCARNA17.1-201ENST00000516211 143 ntBASIC2.5□□□□□ -2.01
TPM1P09493 SCARNA17.2-201ENST00000516334 143 ntBASIC2.5□□□□□ -2.01
TPM1P09493 RNU6-751P-201ENST00000516382 101 ntBASIC2.5□□□□□ -2.01
TPM1P09493 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.5□□□□□ -2.01
TPM1P09493 AC103783.1-201ENST00000520506 373 ntBASIC2.5□□□□□ -2.01
TPM1P09493 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TPM1P09493 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.5□□□□□ -2.01
TPM1P09493 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.5□□□□□ -2.01
TPM1P09493 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.5□□□□□ -2.01
TPM1P09493 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.5□□□□□ -2.01
TPM1P09493 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.5□□□□□ -2.01
TPM1P09493 AC006023.1-201ENST00000603944 259 ntBASIC2.5□□□□□ -2.01
TPM1P09493 AC091946.2-201ENST00000606105 291 ntBASIC2.5□□□□□ -2.01
TPM1P09493 AC103810.6-201ENST00000606708 136 ntBASIC2.5□□□□□ -2.01
TPM1P09493 AC025594.3-201ENST00000613068 790 ntBASIC2.5□□□□□ -2.01
TPM1P09493 SCARNA17.4-201ENST00000614296 143 ntBASIC2.5□□□□□ -2.01
TPM1P09493 MIR203B-201ENST00000636080 86 ntBASIC2.5□□□□□ -2.01
TPM1P09493 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
TPM1P09493 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.49□□□□□ -2.01
TPM1P09493 RNU6-650P-201ENST00000365658 111 ntBASIC2.49□□□□□ -2.01
TPM1P09493 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TPM1P09493 RN7SKP27-201ENST00000410684 333 ntBASIC2.49□□□□□ -2.01
TPM1P09493 CCDC58P2-201ENST00000417131 366 ntBASIC2.49□□□□□ -2.01
TPM1P09493 AC018630.2-202ENST00000422992 927 ntBASIC2.49□□□□□ -2.01
TPM1P09493 VN1R10P-201ENST00000447106 875 ntBASIC2.49□□□□□ -2.01
TPM1P09493 TRGVB-201ENST00000453257 471 ntBASIC2.49□□□□□ -2.01
TPM1P09493 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.49□□□□□ -2.01
TPM1P09493 AL672167.3-201ENST00000465951 960 ntBASIC2.49□□□□□ -2.01
TPM1P09493 LARP1BP2-201ENST00000486594 519 ntBASIC2.49□□□□□ -2.01
TPM1P09493 AC109486.1-201ENST00000486833 374 ntBASIC2.49□□□□□ -2.01
TPM1P09493 AC138853.1-201ENST00000503549 823 ntBASIC2.49□□□□□ -2.01
TPM1P09493 BOLA3P3-201ENST00000505182 232 ntBASIC2.49□□□□□ -2.01
TPM1P09493 AC114786.4-201ENST00000508771 728 ntBASIC2.49□□□□□ -2.01
TPM1P09493 AC114797.1-201ENST00000514003 728 ntBASIC2.49□□□□□ -2.01
TPM1P09493 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.49□□□□□ -2.01
TPM1P09493 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC2.49□□□□□ -2.01
TPM1P09493 BTF3P12-201ENST00000519620 469 ntBASIC2.49□□□□□ -2.01
TPM1P09493 AP003066.2-201ENST00000529375 555 ntBASIC2.49□□□□□ -2.01
TPM1P09493 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.49□□□□□ -2.01
TPM1P09493 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.49□□□□□ -2.01
TPM1P09493 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.49□□□□□ -2.01
TPM1P09493 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC2.49□□□□□ -2.01
TPM1P09493 MIR1254-2-201ENST00000579553 63 ntBASIC2.49□□□□□ -2.01
TPM1P09493 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.49□□□□□ -2.01
TPM1P09493 ZNF92P2-201ENST00000600543 1059 ntBASIC2.49□□□□□ -2.01
TPM1P09493 AP002906.1-201ENST00000603405 233 ntBASIC2.49□□□□□ -2.01
TPM1P09493 AC080013.4-201ENST00000607624 649 ntBASIC2.49□□□□□ -2.01
TPM1P09493 AC005332.10-201ENST00000612725 619 ntBASIC2.49□□□□□ -2.01
TPM1P09493 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.49□□□□□ -2.01
TPM1P09493 OR4G2P-202ENST00000641004 1759 ntBASIC2.49□□□□□ -2.01
TPM1P09493 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
TPM1P09493 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.48□□□□□ -2.01
TPM1P09493 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
TPM1P09493 OR56A5-201ENST00000340110 738 ntBASIC2.48□□□□□ -2.01
TPM1P09493 RNU6-792P-201ENST00000363490 107 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms