Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
HLA-DOAP06340 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DOAP06340 AC011712.1-201ENST00000588959 234 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DOAP06340 RPL23AP92-201ENST00000603609 255 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 AC010680.3-201ENST00000604215 520 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 AC121334.2-201ENST00000605387 271 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 AL442067.2-201ENST00000614033 363 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 AC009161.2-201ENST00000624626 138 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 U6.105-201ENST00000637379 88 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 AC100810.6-201ENST00000638068 285 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DOAP06340 AC007823.1-201ENST00000569932 1566 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
HLA-DOAP06340 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DOAP06340 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DOAP06340 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
HLA-DOAP06340 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
HLA-DOAP06340 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HLA-DOAP06340 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
HLA-DOAP06340 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DOAP06340 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DOAP06340 MFSD8-236ENST00000641509 4050 ntBASIC4.33□□□□□ -1.72
HLA-DOAP06340 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
HLA-DOAP06340 LINC01109-201ENST00000603837 3081 ntBASIC4.33□□□□□ -1.72
HLA-DOAP06340 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DOAP06340 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DOAP06340 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DOAP06340 AC097714.1-201ENST00000511272 1647 ntBASIC4.33□□□□□ -1.72
HLA-DOAP06340 RNU6-845P-201ENST00000362578 103 ntBASIC4.33□□□□□ -1.72
HLA-DOAP06340 Y_RNA.333-201ENST00000365274 102 ntBASIC4.33□□□□□ -1.72
HLA-DOAP06340 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DOAP06340 AL356057.2-201ENST00000403318 432 ntBASIC4.33□□□□□ -1.72
HLA-DOAP06340 AL356432.1-201ENST00000405809 419 ntBASIC4.33□□□□□ -1.72
HLA-DOAP06340 RNU2-8P-201ENST00000410727 190 ntBASIC4.33□□□□□ -1.72
HLA-DOAP06340 AL353678.1-201ENST00000422735 741 ntBASIC4.33□□□□□ -1.72
HLA-DOAP06340 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DOAP06340 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DOAP06340 AC016691.1-201ENST00000441321 413 ntBASIC4.33□□□□□ -1.72
HLA-DOAP06340 EIF4A1P11-201ENST00000451239 222 ntBASIC4.33□□□□□ -1.72
HLA-DOAP06340 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DOAP06340 CACYBPP2-201ENST00000453625 678 ntBASIC4.33□□□□□ -1.72
HLA-DOAP06340 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DOAP06340 AC020893.1-201ENST00000502452 580 ntBASIC4.33□□□□□ -1.72
HLA-DOAP06340 SCARNA24.1-201ENST00000516465 137 ntBASIC4.33□□□□□ -1.72
HLA-DOAP06340 RN7SKP277-201ENST00000516895 283 ntBASIC4.33□□□□□ -1.72
HLA-DOAP06340 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.33□□□□□ -1.72
HLA-DOAP06340 IGKV2D-36-201ENST00000518643 226 ntBASIC4.33□□□□□ -1.72
HLA-DOAP06340 PSMA2P1-201ENST00000526365 646 ntBASIC4.33□□□□□ -1.72
HLA-DOAP06340 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DOAP06340 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DOAP06340 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DOAP06340 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DOAP06340 AC005034.5-201ENST00000604219 466 ntBASIC4.33□□□□□ -1.72
HLA-DOAP06340 AC126177.8-201ENST00000618339 1015 ntBASIC4.33□□□□□ -1.72
HLA-DOAP06340 AP001005.3-201ENST00000622049 129 ntBASIC4.33□□□□□ -1.72
HLA-DOAP06340 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DOAP06340 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HLA-DOAP06340 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DOAP06340 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DOAP06340 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DOAP06340 CKAP2P1-201ENST00000555477 2049 ntBASIC4.33□□□□□ -1.72
HLA-DOAP06340 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DOAP06340 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DOAP06340 AC092447.10-201ENST00000620607 1652 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DOAP06340 AC068254.2-201ENST00000623938 3577 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DOAP06340 BTBD10P1-201ENST00000549824 1352 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HLA-DOAP06340 RPL7P26-201ENST00000333817 754 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 RNU6-223P-201ENST00000362830 107 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DOAP06340 RNU6-332P-201ENST00000391193 108 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 RNU6-1148P-201ENST00000410992 104 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DOAP06340 RPS7P15-201ENST00000415804 584 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 CYCSP10-201ENST00000417973 294 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 RPL30P3-201ENST00000424262 333 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DOAP06340 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 ATP5HP2-201ENST00000433885 485 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 AC119618.1-201ENST00000434191 222 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 AL353597.2-202ENST00000434901 373 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 RPL12P46-201ENST00000436610 195 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 SEPT14P3-201ENST00000439401 183 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 AL732372.2-207ENST00000445840 183 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 AL136380.1-201ENST00000447970 162 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 SEPT14P2-201ENST00000453405 183 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 RPL37P6-202ENST00000464216 403 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DOAP06340 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DOAP06340 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DOAP06340 SEPT14P4-201ENST00000513445 186 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 RNA5SP337-201ENST00000517007 109 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 IGLVIV-53-201ENST00000520107 367 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 FO082796.1-201ENST00000523795 183 ntBASIC4.32□□□□□ -1.72
HLA-DOAP06340 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DOAP06340 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.32□□□□□ -1.72
HLA-DOAP06340 AC007424.1-203ENST00000554613 687 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms