Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL161798.1-201ENST00000604630 131 ntBASIC5.03□□□□□ -1.6
PDGFAP04085 AC123912.5-201ENST00000605470 343 ntBASIC5.03□□□□□ -1.6
PDGFAP04085 AL121917.1-203ENST00000605534 577 ntBASIC5.03□□□□□ -1.6
PDGFAP04085 MIR3976-201ENST00000606807 139 ntBASIC5.03□□□□□ -1.6
PDGFAP04085 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.03□□□□□ -1.6
PDGFAP04085 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.03□□□□□ -1.6
PDGFAP04085 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.03□□□□□ -1.6
PDGFAP04085 MIR6715B-201ENST00000637172 77 ntBASIC5.03□□□□□ -1.6
PDGFAP04085 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PDGFAP04085 AP001642.1-201ENST00000624727 2117 ntBASIC5.03□□□□□ -1.6
PDGFAP04085 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFAP04085 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.03□□□□□ -1.6
PDGFAP04085 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFAP04085 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.03□□□□□ -1.6
PDGFAP04085 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.03□□□□□ -1.61
PDGFAP04085 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.03□□□□□ -1.61
PDGFAP04085 AC083843.2-201ENST00000568248 6253 ntBASIC5.02□□□□□ -1.61
PDGFAP04085 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFAP04085 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.02□□□□□ -1.61
PDGFAP04085 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.02□□□□□ -1.61
PDGFAP04085 SMG1P4-204ENST00000523028 4131 ntBASIC5.02□□□□□ -1.61
PDGFAP04085 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFAP04085 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.02□□□□□ -1.61
PDGFAP04085 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFAP04085 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFAP04085 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFAP04085 MIR412-201ENST00000362142 91 ntBASIC5.02□□□□□ -1.61
PDGFAP04085 Y_RNA.447-201ENST00000384184 113 ntBASIC5.02□□□□□ -1.61
PDGFAP04085 Y_RNA.461-201ENST00000384263 103 ntBASIC5.02□□□□□ -1.61
PDGFAP04085 Y_RNA.552-201ENST00000384665 112 ntBASIC5.02□□□□□ -1.61
PDGFAP04085 RNA5SP91-201ENST00000390902 119 ntBASIC5.02□□□□□ -1.61
PDGFAP04085 AP000580.1-201ENST00000404439 358 ntBASIC5.02□□□□□ -1.61
PDGFAP04085 AL009179.1-201ENST00000406085 265 ntBASIC5.02□□□□□ -1.61
PDGFAP04085 RNU6-1025P-201ENST00000410629 104 ntBASIC5.02□□□□□ -1.61
PDGFAP04085 AL158156.1-201ENST00000422509 473 ntBASIC5.02□□□□□ -1.61
PDGFAP04085 AL049745.1-201ENST00000433953 286 ntBASIC5.02□□□□□ -1.61
PDGFAP04085 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.02□□□□□ -1.61
PDGFAP04085 OR1H1P-201ENST00000448731 937 ntBASIC5.02□□□□□ -1.61
PDGFAP04085 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.02□□□□□ -1.61
PDGFAP04085 AC133134.1-201ENST00000466800 359 ntBASIC5.02□□□□□ -1.61
PDGFAP04085 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.02□□□□□ -1.61
PDGFAP04085 RPS17P5-201ENST00000498293 408 ntBASIC5.02□□□□□ -1.61
PDGFAP04085 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.02□□□□□ -1.61
PDGFAP04085 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.02□□□□□ -1.61
PDGFAP04085 AC125232.2-201ENST00000592457 143 ntBASIC5.02□□□□□ -1.61
PDGFAP04085 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.02□□□□□ -1.61
PDGFAP04085 MTND4LP5-201ENST00000605152 292 ntBASIC5.02□□□□□ -1.61
PDGFAP04085 HMGB1P24-202ENST00000615653 685 ntBASIC5.02□□□□□ -1.61
PDGFAP04085 U6.104-201ENST00000637979 90 ntBASIC5.02□□□□□ -1.61
PDGFAP04085 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.02□□□□□ -1.61
PDGFAP04085 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFAP04085 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFAP04085 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFAP04085 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
PDGFAP04085 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFAP04085 AC114947.2-201ENST00000565748 2125 ntBASIC5.02□□□□□ -1.61
PDGFAP04085 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFAP04085 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.02□□□□□ -1.61
PDGFAP04085 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.02□□□□□ -1.61
PDGFAP04085 ZNF72P-201ENST00000425869 1908 ntBASIC5.01□□□□□ -1.61
PDGFAP04085 AC100778.3-201ENST00000580060 1750 ntBASIC5.01□□□□□ -1.61
PDGFAP04085 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDGFAP04085 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.01□□□□□ -1.61
PDGFAP04085 AL356489.2-201ENST00000566968 3528 ntBASIC5.01□□□□□ -1.61
PDGFAP04085 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.01□□□□□ -1.61
PDGFAP04085 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PDGFAP04085 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDGFAP04085 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDGFAP04085 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.01□□□□□ -1.61
PDGFAP04085 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDGFAP04085 U8.8-201ENST00000365399 135 ntBASIC5.01□□□□□ -1.61
PDGFAP04085 Y_RNA.551-201ENST00000384661 102 ntBASIC5.01□□□□□ -1.61
PDGFAP04085 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5.01□□□□□ -1.61
PDGFAP04085 RNA5SP487-201ENST00000410186 122 ntBASIC5.01□□□□□ -1.61
PDGFAP04085 PGBD4P6-201ENST00000421501 610 ntBASIC5.01□□□□□ -1.61
PDGFAP04085 GSTM5P1-201ENST00000434751 660 ntBASIC5.01□□□□□ -1.61
PDGFAP04085 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.01□□□□□ -1.61
PDGFAP04085 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.01□□□□□ -1.61
PDGFAP04085 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.01□□□□□ -1.61
PDGFAP04085 FO393415.2-201ENST00000480085 343 ntBASIC5.01□□□□□ -1.61
PDGFAP04085 AC083982.1-201ENST00000485679 344 ntBASIC5.01□□□□□ -1.61
PDGFAP04085 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.01□□□□□ -1.61
PDGFAP04085 RNU6-1143P-201ENST00000516125 104 ntBASIC5.01□□□□□ -1.61
PDGFAP04085 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.01□□□□□ -1.61
PDGFAP04085 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.01□□□□□ -1.61
PDGFAP04085 AC084851.1-201ENST00000529105 249 ntBASIC5.01□□□□□ -1.61
PDGFAP04085 AC004584.2-201ENST00000570407 410 ntBASIC5.01□□□□□ -1.61
PDGFAP04085 AC078899.3-201ENST00000599065 212 ntBASIC5.01□□□□□ -1.61
PDGFAP04085 AC105254.2-201ENST00000603636 436 ntBASIC5.01□□□□□ -1.61
PDGFAP04085 AC087783.2-201ENST00000605070 562 ntBASIC5.01□□□□□ -1.61
PDGFAP04085 HMGB1P50-201ENST00000605814 607 ntBASIC5.01□□□□□ -1.61
PDGFAP04085 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.01□□□□□ -1.61
PDGFAP04085 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PDGFAP04085 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDGFAP04085 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.01□□□□□ -1.61
PDGFAP04085 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDGFAP04085 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
PDGFAP04085 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PDGFAP04085 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
PDGFAP04085 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms