Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.14□□□□□ -1.91
PDGFBP01127 AL450489.1-201ENST00000612071 468 ntBASIC3.14□□□□□ -1.91
PDGFBP01127 AL592295.2-201ENST00000612578 206 ntBASIC3.14□□□□□ -1.91
PDGFBP01127 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.14□□□□□ -1.91
PDGFBP01127 AC027309.3-201ENST00000623419 351 ntBASIC3.14□□□□□ -1.91
PDGFBP01127 MIR622-201ENST00000638396 96 ntBASIC3.14□□□□□ -1.91
PDGFBP01127 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PDGFBP01127 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.14□□□□□ -1.91
PDGFBP01127 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.14□□□□□ -1.91
PDGFBP01127 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PDGFBP01127 FAM35BP-202ENST00000497389 3337 ntBASIC3.14□□□□□ -1.91
PDGFBP01127 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PDGFBP01127 SDAD1P2-201ENST00000441308 2028 ntBASIC3.14□□□□□ -1.91
PDGFBP01127 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
PDGFBP01127 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PDGFBP01127 AC093908.1-201ENST00000623125 8092 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.13□□□□□ -1.91
PDGFBP01127 PWAR6-201ENST00000552334 4618 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 AC091564.4-201ENST00000533934 2194 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 AL672167.1-206ENST00000356293 943 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 RNU5A-1-201ENST00000362698 116 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 RNU6-253P-201ENST00000384730 105 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 RNU6-952P-201ENST00000391164 108 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 MTND4P13-201ENST00000402078 1023 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.13□□□□□ -1.91
PDGFBP01127 AC003685.2-201ENST00000422795 395 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.13□□□□□ -1.91
PDGFBP01127 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.13□□□□□ -1.91
PDGFBP01127 ELOCP23-201ENST00000452014 332 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 RNU7-136P-201ENST00000458819 69 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 SETP11-201ENST00000473027 690 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 UBL5P3-201ENST00000475112 231 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 RPS3AP50-201ENST00000487064 803 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 AC098862.1-201ENST00000504991 413 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.13□□□□□ -1.91
PDGFBP01127 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.13□□□□□ -1.91
PDGFBP01127 PCBP2P3-201ENST00000509726 843 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 TXNP6-201ENST00000510190 310 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 AC008413.1-201ENST00000511864 177 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.13□□□□□ -1.91
PDGFBP01127 DEFB131D-201ENST00000526803 184 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.13□□□□□ -1.91
PDGFBP01127 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PDGFBP01127 OR7K1P-201ENST00000546439 926 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.13□□□□□ -1.91
PDGFBP01127 AC090888.2-201ENST00000559765 1144 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 AC087465.1-201ENST00000560574 245 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.13□□□□□ -1.91
PDGFBP01127 AL845331.3-202ENST00000562856 261 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.13□□□□□ -1.91
PDGFBP01127 AC005951.1-201ENST00000576706 485 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.13□□□□□ -1.91
PDGFBP01127 GLUD1P4-201ENST00000590914 418 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 Z99289.3-201ENST00000605586 594 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 AL590099.1-201ENST00000615276 138 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 SNORD39.4-201ENST00000620099 78 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 AL445264.1-201ENST00000621719 171 ntBASIC3.13□□□□□ -1.91
PDGFBP01127 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PDGFBP01127 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.13□□□□□ -1.91
PDGFBP01127 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PDGFBP01127 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.13□□□□□ -1.91
PDGFBP01127 AP000526.1-201ENST00000603308 1388 ntBASIC3.12□□□□□ -1.91
PDGFBP01127 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.12□□□□□ -1.91
PDGFBP01127 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PDGFBP01127 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PDGFBP01127 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PDGFBP01127 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.12□□□□□ -1.91
PDGFBP01127 RNU6-76P-201ENST00000384060 104 ntBASIC3.12□□□□□ -1.91
PDGFBP01127 RNU6-1200P-201ENST00000384162 107 ntBASIC3.12□□□□□ -1.91
PDGFBP01127 SNORA70B-201ENST00000384210 135 ntBASIC3.12□□□□□ -1.91
PDGFBP01127 AF228730.1-201ENST00000397972 663 ntBASIC3.12□□□□□ -1.91
PDGFBP01127 RNU2-52P-201ENST00000410680 190 ntBASIC3.12□□□□□ -1.91
PDGFBP01127 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.12□□□□□ -1.91
PDGFBP01127 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.12□□□□□ -1.91
PDGFBP01127 RPL7P46-201ENST00000425129 740 ntBASIC3.12□□□□□ -1.91
PDGFBP01127 SKP1P1-201ENST00000438081 489 ntBASIC3.12□□□□□ -1.91
PDGFBP01127 RPL26P6-201ENST00000440913 438 ntBASIC3.12□□□□□ -1.91
PDGFBP01127 MTND1P31-201ENST00000449206 961 ntBASIC3.12□□□□□ -1.91
PDGFBP01127 OR6C5P-201ENST00000452388 923 ntBASIC3.12□□□□□ -1.91
PDGFBP01127 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.12□□□□□ -1.91
PDGFBP01127 AL109741.2-201ENST00000455561 343 ntBASIC3.12□□□□□ -1.91
PDGFBP01127 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.12□□□□□ -1.91
PDGFBP01127 AC004801.2-202ENST00000463559 283 ntBASIC3.12□□□□□ -1.91
PDGFBP01127 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.12□□□□□ -1.91
PDGFBP01127 AC147055.4-201ENST00000504399 745 ntBASIC3.12□□□□□ -1.91
PDGFBP01127 AC109464.2-201ENST00000510242 943 ntBASIC3.12□□□□□ -1.91
PDGFBP01127 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.12□□□□□ -1.91
PDGFBP01127 RNU6-528P-201ENST00000516926 100 ntBASIC3.12□□□□□ -1.91
PDGFBP01127 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.12□□□□□ -1.91
PDGFBP01127 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.12□□□□□ -1.91
PDGFBP01127 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.12□□□□□ -1.91
PDGFBP01127 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.12□□□□□ -1.91
PDGFBP01127 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.12□□□□□ -1.91
PDGFBP01127 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.12□□□□□ -1.91
PDGFBP01127 MTCO3P24-201ENST00000572729 782 ntBASIC3.12□□□□□ -1.91
PDGFBP01127 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.12□□□□□ -1.91
PDGFBP01127 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.12□□□□□ -1.91
PDGFBP01127 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.12□□□□□ -1.91
PDGFBP01127 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.12□□□□□ -1.91
PDGFBP01127 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms