Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
ALDH1A1P00352 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ALDH1A1P00352 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
ALDH1A1P00352 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.88□□□□□ -1.47
ALDH1A1P00352 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ALDH1A1P00352 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ALDH1A1P00352 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ALDH1A1P00352 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.87□□□□□ -1.47
ALDH1A1P00352 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
ALDH1A1P00352 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
ALDH1A1P00352 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
ALDH1A1P00352 AC093849.1-201ENST00000563631 2209 ntBASIC5.87□□□□□ -1.47
ALDH1A1P00352 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ALDH1A1P00352 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
ALDH1A1P00352 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.87□□□□□ -1.47
ALDH1A1P00352 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.87□□□□□ -1.47
ALDH1A1P00352 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ALDH1A1P00352 RNU4-78P-201ENST00000410940 126 ntBASIC5.87□□□□□ -1.47
ALDH1A1P00352 RPL19P1-201ENST00000411635 428 ntBASIC5.87□□□□□ -1.47
ALDH1A1P00352 DPPA2P2-201ENST00000418220 897 ntBASIC5.87□□□□□ -1.47
ALDH1A1P00352 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.87□□□□□ -1.47
ALDH1A1P00352 AC006946.1-201ENST00000429106 328 ntBASIC5.87□□□□□ -1.47
ALDH1A1P00352 LINC02210-201ENST00000444561 288 ntBASIC5.87□□□□□ -1.47
ALDH1A1P00352 AC022034.3-201ENST00000471393 478 ntBASIC5.87□□□□□ -1.47
ALDH1A1P00352 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.87□□□□□ -1.47
ALDH1A1P00352 MRPS33P2-201ENST00000507850 322 ntBASIC5.87□□□□□ -1.47
ALDH1A1P00352 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.87□□□□□ -1.47
ALDH1A1P00352 AC007016.1-201ENST00000512110 244 ntBASIC5.87□□□□□ -1.47
ALDH1A1P00352 Y_RNA.689-201ENST00000516589 107 ntBASIC5.87□□□□□ -1.47
ALDH1A1P00352 AC069113.1-201ENST00000517763 267 ntBASIC5.87□□□□□ -1.47
ALDH1A1P00352 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.87□□□□□ -1.47
ALDH1A1P00352 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.87□□□□□ -1.47
ALDH1A1P00352 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
ALDH1A1P00352 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.87□□□□□ -1.47
ALDH1A1P00352 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.87□□□□□ -1.47
ALDH1A1P00352 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.87□□□□□ -1.47
ALDH1A1P00352 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.87□□□□□ -1.47
ALDH1A1P00352 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.87□□□□□ -1.47
ALDH1A1P00352 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.87□□□□□ -1.47
ALDH1A1P00352 AC123768.4-201ENST00000616244 701 ntBASIC5.87□□□□□ -1.47
ALDH1A1P00352 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ALDH1A1P00352 AL161637.1-201ENST00000622380 412 ntBASIC5.87□□□□□ -1.47
ALDH1A1P00352 FP236240.3-201ENST00000623061 327 ntBASIC5.87□□□□□ -1.47
ALDH1A1P00352 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.87□□□□□ -1.47
ALDH1A1P00352 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ALDH1A1P00352 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ALDH1A1P00352 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.87□□□□□ -1.47
ALDH1A1P00352 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ALDH1A1P00352 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ALDH1A1P00352 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.87□□□□□ -1.47
ALDH1A1P00352 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ALDH1A1P00352 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.86□□□□□ -1.47
ALDH1A1P00352 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ALDH1A1P00352 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
ALDH1A1P00352 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
ALDH1A1P00352 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
ALDH1A1P00352 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
ALDH1A1P00352 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.86□□□□□ -1.47
ALDH1A1P00352 AC015799.1-201ENST00000622996 3122 ntBASIC5.86□□□□□ -1.47
ALDH1A1P00352 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ALDH1A1P00352 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ALDH1A1P00352 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
ALDH1A1P00352 AC020633.1-201ENST00000468439 2247 ntBASIC5.86□□□□□ -1.47
ALDH1A1P00352 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
ALDH1A1P00352 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.86□□□□□ -1.47
ALDH1A1P00352 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.86□□□□□ -1.47
ALDH1A1P00352 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ALDH1A1P00352 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ALDH1A1P00352 RN7SKP153-201ENST00000365026 316 ntBASIC5.86□□□□□ -1.47
ALDH1A1P00352 RNU6-215P-201ENST00000365169 102 ntBASIC5.86□□□□□ -1.47
ALDH1A1P00352 AL591034.2-201ENST00000402839 359 ntBASIC5.86□□□□□ -1.47
ALDH1A1P00352 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.86□□□□□ -1.47
ALDH1A1P00352 RNU2-22P-201ENST00000411266 212 ntBASIC5.86□□□□□ -1.47
ALDH1A1P00352 AC073063.1-201ENST00000434352 607 ntBASIC5.86□□□□□ -1.47
ALDH1A1P00352 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.86□□□□□ -1.47
ALDH1A1P00352 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.86□□□□□ -1.47
ALDH1A1P00352 KRT8P51-201ENST00000438938 274 ntBASIC5.86□□□□□ -1.47
ALDH1A1P00352 RPL23AP33-201ENST00000442301 452 ntBASIC5.86□□□□□ -1.47
ALDH1A1P00352 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.86□□□□□ -1.47
ALDH1A1P00352 AC093815.1-201ENST00000508637 280 ntBASIC5.86□□□□□ -1.47
ALDH1A1P00352 AC113155.1-201ENST00000511141 769 ntBASIC5.86□□□□□ -1.47
ALDH1A1P00352 SCARNA20.4-201ENST00000516969 131 ntBASIC5.86□□□□□ -1.47
ALDH1A1P00352 AC090151.1-201ENST00000520784 730 ntBASIC5.86□□□□□ -1.47
ALDH1A1P00352 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC5.86□□□□□ -1.47
ALDH1A1P00352 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.86□□□□□ -1.47
ALDH1A1P00352 AP001880.2-201ENST00000538233 448 ntBASIC5.86□□□□□ -1.47
ALDH1A1P00352 MIR3160-1-201ENST00000577972 85 ntBASIC5.86□□□□□ -1.47
ALDH1A1P00352 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.86□□□□□ -1.47
ALDH1A1P00352 AC007566.2-201ENST00000603642 413 ntBASIC5.86□□□□□ -1.47
ALDH1A1P00352 AL355816.1-201ENST00000607951 118 ntBASIC5.86□□□□□ -1.47
ALDH1A1P00352 AL365222.1-201ENST00000614661 98 ntBASIC5.86□□□□□ -1.47
ALDH1A1P00352 AC034102.8-201ENST00000615146 484 ntBASIC5.86□□□□□ -1.47
ALDH1A1P00352 AC007998.5-201ENST00000622938 237 ntBASIC5.86□□□□□ -1.47
ALDH1A1P00352 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.86□□□□□ -1.47
ALDH1A1P00352 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ALDH1A1P00352 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ALDH1A1P00352 AC005725.1-201ENST00000577346 2607 ntBASIC5.86□□□□□ -1.47
ALDH1A1P00352 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
ALDH1A1P00352 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.86□□□□□ -1.47
ALDH1A1P00352 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms