Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 MIR554-201ENST00000384874 96 ntBASIC3.47□□□□□ -1.85
LDB3O75112 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
LDB3O75112 AC068050.1-201ENST00000394891 380 ntBASIC3.47□□□□□ -1.85
LDB3O75112 USP9YP27-201ENST00000418455 438 ntBASIC3.47□□□□□ -1.85
LDB3O75112 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.47□□□□□ -1.85
LDB3O75112 FCF1P1-201ENST00000432690 571 ntBASIC3.47□□□□□ -1.85
LDB3O75112 RPL21P112-201ENST00000434403 463 ntBASIC3.47□□□□□ -1.85
LDB3O75112 UBE2V1P13-201ENST00000436983 439 ntBASIC3.47□□□□□ -1.85
LDB3O75112 AL138799.3-201ENST00000438968 350 ntBASIC3.47□□□□□ -1.85
LDB3O75112 MTND4LP16-201ENST00000440828 295 ntBASIC3.47□□□□□ -1.85
LDB3O75112 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.47□□□□□ -1.85
LDB3O75112 NOTCH2P1-201ENST00000443481 624 ntBASIC3.47□□□□□ -1.85
LDB3O75112 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.47□□□□□ -1.85
LDB3O75112 AC022364.2-201ENST00000457963 554 ntBASIC3.47□□□□□ -1.85
LDB3O75112 RN7SL542P-201ENST00000467147 294 ntBASIC3.47□□□□□ -1.85
LDB3O75112 AP000852.1-201ENST00000472460 573 ntBASIC3.47□□□□□ -1.85
LDB3O75112 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.47□□□□□ -1.85
LDB3O75112 AC021382.1-201ENST00000483523 359 ntBASIC3.47□□□□□ -1.85
LDB3O75112 UBE2CP3-201ENST00000502715 450 ntBASIC3.47□□□□□ -1.85
LDB3O75112 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.47□□□□□ -1.85
LDB3O75112 AC114967.1-201ENST00000504890 259 ntBASIC3.47□□□□□ -1.85
LDB3O75112 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.47□□□□□ -1.85
LDB3O75112 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.47□□□□□ -1.85
LDB3O75112 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.47□□□□□ -1.85
LDB3O75112 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.47□□□□□ -1.85
LDB3O75112 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.47□□□□□ -1.85
LDB3O75112 AC109635.3-201ENST00000529536 185 ntBASIC3.47□□□□□ -1.85
LDB3O75112 SETP7-201ENST00000552169 453 ntBASIC3.47□□□□□ -1.85
LDB3O75112 AL512360.1-201ENST00000555346 234 ntBASIC3.47□□□□□ -1.85
LDB3O75112 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.47□□□□□ -1.85
LDB3O75112 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.47□□□□□ -1.85
LDB3O75112 AC009101.1-201ENST00000568135 242 ntBASIC3.47□□□□□ -1.85
LDB3O75112 AC034268.2-201ENST00000571784 482 ntBASIC3.47□□□□□ -1.85
LDB3O75112 MIR3682-201ENST00000581338 84 ntBASIC3.47□□□□□ -1.85
LDB3O75112 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.47□□□□□ -1.85
LDB3O75112 AC006130.2-201ENST00000586202 326 ntBASIC3.47□□□□□ -1.85
LDB3O75112 AC055876.5-201ENST00000605667 259 ntBASIC3.47□□□□□ -1.85
LDB3O75112 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.47□□□□□ -1.85
LDB3O75112 AC009033.1-201ENST00000624279 431 ntBASIC3.47□□□□□ -1.85
LDB3O75112 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LDB3O75112 MIR1321-201ENST00000637766 79 ntBASIC3.47□□□□□ -1.85
LDB3O75112 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LDB3O75112 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LDB3O75112 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LDB3O75112 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.47□□□□□ -1.85
LDB3O75112 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.47□□□□□ -1.85
LDB3O75112 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
LDB3O75112 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
LDB3O75112 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
LDB3O75112 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.46□□□□□ -1.86
LDB3O75112 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LDB3O75112 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LDB3O75112 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
LDB3O75112 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.46□□□□□ -1.86
LDB3O75112 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LDB3O75112 RNU6-1249P-201ENST00000363237 111 ntBASIC3.46□□□□□ -1.86
LDB3O75112 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
LDB3O75112 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
LDB3O75112 RNU6-629P-201ENST00000384061 103 ntBASIC3.46□□□□□ -1.86
LDB3O75112 U3.20-201ENST00000390909 217 ntBASIC3.46□□□□□ -1.86
LDB3O75112 RPL7P25-201ENST00000404151 721 ntBASIC3.46□□□□□ -1.86
LDB3O75112 AC078974.1-201ENST00000411597 223 ntBASIC3.46□□□□□ -1.86
LDB3O75112 TOMM22P1-201ENST00000418578 312 ntBASIC3.46□□□□□ -1.86
LDB3O75112 AC007389.2-201ENST00000434630 306 ntBASIC3.46□□□□□ -1.86
LDB3O75112 AC002486.1-201ENST00000435098 391 ntBASIC3.46□□□□□ -1.86
LDB3O75112 NDUFB1P1-201ENST00000435191 180 ntBASIC3.46□□□□□ -1.86
LDB3O75112 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.46□□□□□ -1.86
LDB3O75112 AC132479.1-201ENST00000449160 144 ntBASIC3.46□□□□□ -1.86
LDB3O75112 RNU6-420P-201ENST00000458780 107 ntBASIC3.46□□□□□ -1.86
LDB3O75112 FTH1P2-201ENST00000466086 412 ntBASIC3.46□□□□□ -1.86
LDB3O75112 HMGB1P25-201ENST00000468402 607 ntBASIC3.46□□□□□ -1.86
LDB3O75112 AC023598.1-201ENST00000472521 361 ntBASIC3.46□□□□□ -1.86
LDB3O75112 RPL31P13-201ENST00000484151 370 ntBASIC3.46□□□□□ -1.86
LDB3O75112 MTCO2P30-201ENST00000503662 364 ntBASIC3.46□□□□□ -1.86
LDB3O75112 AC018710.1-201ENST00000506509 158 ntBASIC3.46□□□□□ -1.86
LDB3O75112 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.46□□□□□ -1.86
LDB3O75112 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.46□□□□□ -1.86
LDB3O75112 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
LDB3O75112 Y_RNA.672-201ENST00000516289 104 ntBASIC3.46□□□□□ -1.86
LDB3O75112 Y_RNA.693-201ENST00000516641 110 ntBASIC3.46□□□□□ -1.86
LDB3O75112 RNA5SP309-201ENST00000516670 106 ntBASIC3.46□□□□□ -1.86
LDB3O75112 RNU6-1153P-201ENST00000516760 105 ntBASIC3.46□□□□□ -1.86
LDB3O75112 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.46□□□□□ -1.86
LDB3O75112 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.46□□□□□ -1.86
LDB3O75112 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.46□□□□□ -1.86
LDB3O75112 AC123904.3-201ENST00000547218 814 ntBASIC3.46□□□□□ -1.86
LDB3O75112 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.46□□□□□ -1.86
LDB3O75112 AP001429.1-201ENST00000602568 530 ntBASIC3.46□□□□□ -1.86
LDB3O75112 AC011468.4-201ENST00000603942 409 ntBASIC3.46□□□□□ -1.86
LDB3O75112 AP001330.5-201ENST00000607176 411 ntBASIC3.46□□□□□ -1.86
LDB3O75112 AL121757.2-201ENST00000611223 313 ntBASIC3.46□□□□□ -1.86
LDB3O75112 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.46□□□□□ -1.86
LDB3O75112 AC079597.1-201ENST00000624306 508 ntBASIC3.46□□□□□ -1.86
LDB3O75112 AL359697.1-201ENST00000624879 587 ntBASIC3.46□□□□□ -1.86
LDB3O75112 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.46□□□□□ -1.86
LDB3O75112 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.46□□□□□ -1.86
LDB3O75112 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.46□□□□□ -1.86
LDB3O75112 AC099654.5-201ENST00000636479 350 ntBASIC3.46□□□□□ -1.86
LDB3O75112 MIR3662-201ENST00000637030 95 ntBASIC3.46□□□□□ -1.86
LDB3O75112 AP000553.6-201ENST00000641242 118 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms