Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.25□□□□□ -1.89
PRKNO60260 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.25□□□□□ -1.89
PRKNO60260 AC008155.2-201ENST00000464337 397 ntBASIC3.25□□□□□ -1.89
PRKNO60260 AC020893.1-201ENST00000502452 580 ntBASIC3.25□□□□□ -1.89
PRKNO60260 AC010587.1-201ENST00000505809 469 ntBASIC3.25□□□□□ -1.89
PRKNO60260 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.25□□□□□ -1.89
PRKNO60260 AC108078.1-201ENST00000508073 725 ntBASIC3.25□□□□□ -1.89
PRKNO60260 RN7SKP244-201ENST00000516513 307 ntBASIC3.25□□□□□ -1.89
PRKNO60260 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.25□□□□□ -1.89
PRKNO60260 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.25□□□□□ -1.89
PRKNO60260 AP004242.1-201ENST00000533701 349 ntBASIC3.25□□□□□ -1.89
PRKNO60260 AC126177.3-201ENST00000551839 688 ntBASIC3.25□□□□□ -1.89
PRKNO60260 OR4K8P-201ENST00000578842 1048 ntBASIC3.25□□□□□ -1.89
PRKNO60260 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.25□□□□□ -1.89
PRKNO60260 MIR3146-201ENST00000580367 79 ntBASIC3.25□□□□□ -1.89
PRKNO60260 AC007687.1-201ENST00000602704 304 ntBASIC3.25□□□□□ -1.89
PRKNO60260 AC245014.2-201ENST00000603689 287 ntBASIC3.25□□□□□ -1.89
PRKNO60260 AC246785.4-201ENST00000605374 287 ntBASIC3.25□□□□□ -1.89
PRKNO60260 MIR98-201ENST00000606724 119 ntBASIC3.25□□□□□ -1.89
PRKNO60260 AC019176.2-201ENST00000611579 315 ntBASIC3.25□□□□□ -1.89
PRKNO60260 AC136475.10-201ENST00000620253 385 ntBASIC3.25□□□□□ -1.89
PRKNO60260 AL356585.4-201ENST00000623078 1229 ntBASIC3.25□□□□□ -1.89
PRKNO60260 AP003355.3-201ENST00000623465 114 ntBASIC3.25□□□□□ -1.89
PRKNO60260 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PRKNO60260 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PRKNO60260 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PRKNO60260 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
PRKNO60260 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PRKNO60260 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.24□□□□□ -1.89
PRKNO60260 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.24□□□□□ -1.89
PRKNO60260 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.24□□□□□ -1.89
PRKNO60260 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PRKNO60260 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
PRKNO60260 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.24□□□□□ -1.89
PRKNO60260 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
PRKNO60260 OR5J1P-201ENST00000313544 939 ntBASIC3.24□□□□□ -1.89
PRKNO60260 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PRKNO60260 SNORA31-201ENST00000362607 130 ntBASIC3.24□□□□□ -1.89
PRKNO60260 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.24□□□□□ -1.89
PRKNO60260 MIR7-3-201ENST00000384898 110 ntBASIC3.24□□□□□ -1.89
PRKNO60260 RNU6-837P-201ENST00000391056 108 ntBASIC3.24□□□□□ -1.89
PRKNO60260 GSTA9P-201ENST00000406231 611 ntBASIC3.24□□□□□ -1.89
PRKNO60260 RNU6-712P-201ENST00000410558 100 ntBASIC3.24□□□□□ -1.89
PRKNO60260 RNU2-37P-201ENST00000410695 177 ntBASIC3.24□□□□□ -1.89
PRKNO60260 AC119618.1-201ENST00000434191 222 ntBASIC3.24□□□□□ -1.89
PRKNO60260 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.24□□□□□ -1.89
PRKNO60260 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.24□□□□□ -1.89
PRKNO60260 TPT1P14-201ENST00000448018 505 ntBASIC3.24□□□□□ -1.89
PRKNO60260 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.24□□□□□ -1.89
PRKNO60260 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PRKNO60260 AP001086.1-201ENST00000494882 321 ntBASIC3.24□□□□□ -1.89
PRKNO60260 NIPA2P2-201ENST00000496376 1083 ntBASIC3.24□□□□□ -1.89
PRKNO60260 KCTD9P5-201ENST00000504141 1170 ntBASIC3.24□□□□□ -1.89
PRKNO60260 AC005921.1-201ENST00000510589 286 ntBASIC3.24□□□□□ -1.89
PRKNO60260 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.24□□□□□ -1.89
PRKNO60260 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
PRKNO60260 AP006245.1-201ENST00000522549 120 ntBASIC3.24□□□□□ -1.89
PRKNO60260 AL133271.1-201ENST00000538229 291 ntBASIC3.24□□□□□ -1.89
PRKNO60260 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.24□□□□□ -1.89
PRKNO60260 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.24□□□□□ -1.89
PRKNO60260 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.24□□□□□ -1.89
PRKNO60260 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.24□□□□□ -1.89
PRKNO60260 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.24□□□□□ -1.89
PRKNO60260 TPRKBP2-201ENST00000565969 475 ntBASIC3.24□□□□□ -1.89
PRKNO60260 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.24□□□□□ -1.89
PRKNO60260 MIR6863-201ENST00000636112 90 ntBASIC3.24□□□□□ -1.89
PRKNO60260 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
PRKNO60260 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.24□□□□□ -1.89
PRKNO60260 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PRKNO60260 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
PRKNO60260 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.24□□□□□ -1.89
PRKNO60260 MTCO1P9-201ENST00000505577 1534 ntBASIC3.24□□□□□ -1.89
PRKNO60260 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PRKNO60260 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PRKNO60260 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PRKNO60260 AC066616.2-201ENST00000559334 1481 ntBASIC3.23□□□□□ -1.89
PRKNO60260 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.23□□□□□ -1.89
PRKNO60260 AC244517.1-201ENST00000606030 2086 ntBASIC3.23□□□□□ -1.89
PRKNO60260 PRO1804-201ENST00000623780 2050 ntBASIC3.23□□□□□ -1.89
PRKNO60260 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PRKNO60260 RNU4-1-201ENST00000363925 141 ntBASIC3.23□□□□□ -1.89
PRKNO60260 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
PRKNO60260 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.23□□□□□ -1.89
PRKNO60260 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PRKNO60260 MIR19A-201ENST00000384878 82 ntBASIC3.23□□□□□ -1.89
PRKNO60260 AL583834.1-201ENST00000406943 343 ntBASIC3.23□□□□□ -1.89
PRKNO60260 OR1AA1P-201ENST00000419597 916 ntBASIC3.23□□□□□ -1.89
PRKNO60260 PIGFP2-201ENST00000421400 651 ntBASIC3.23□□□□□ -1.89
PRKNO60260 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.23□□□□□ -1.89
PRKNO60260 AC007283.2-201ENST00000424739 197 ntBASIC3.23□□□□□ -1.89
PRKNO60260 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.23□□□□□ -1.89
PRKNO60260 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.23□□□□□ -1.89
PRKNO60260 FCF1P1-201ENST00000432690 571 ntBASIC3.23□□□□□ -1.89
PRKNO60260 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.23□□□□□ -1.89
PRKNO60260 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PRKNO60260 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.23□□□□□ -1.89
PRKNO60260 CYCSP35-201ENST00000451978 304 ntBASIC3.23□□□□□ -1.89
PRKNO60260 C1DP4-201ENST00000455429 424 ntBASIC3.23□□□□□ -1.89
PRKNO60260 RPL7P49-201ENST00000471402 708 ntBASIC3.23□□□□□ -1.89
PRKNO60260 AC126182.1-201ENST00000478134 357 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms