Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SRGAP3O43295 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
SRGAP3O43295 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.92□□□□□ -1.62
SRGAP3O43295 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.92□□□□□ -1.62
SRGAP3O43295 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SRGAP3O43295 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.92□□□□□ -1.62
SRGAP3O43295 Y_RNA.100-201ENST00000363141 102 ntBASIC4.92□□□□□ -1.62
SRGAP3O43295 SNORD74.4-201ENST00000364129 80 ntBASIC4.92□□□□□ -1.62
SRGAP3O43295 Y_RNA.234-201ENST00000364409 97 ntBASIC4.92□□□□□ -1.62
SRGAP3O43295 SNORA33.2-201ENST00000365413 134 ntBASIC4.92□□□□□ -1.62
SRGAP3O43295 Y_RNA.373-201ENST00000365600 103 ntBASIC4.92□□□□□ -1.62
SRGAP3O43295 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.92□□□□□ -1.62
SRGAP3O43295 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.92□□□□□ -1.62
SRGAP3O43295 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.92□□□□□ -1.62
SRGAP3O43295 RNU6-39P-201ENST00000384344 107 ntBASIC4.92□□□□□ -1.62
SRGAP3O43295 RNU2-62P-201ENST00000410868 191 ntBASIC4.92□□□□□ -1.62
SRGAP3O43295 RNU6-193P-201ENST00000410977 107 ntBASIC4.92□□□□□ -1.62
SRGAP3O43295 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SRGAP3O43295 OR1AA1P-201ENST00000419597 916 ntBASIC4.92□□□□□ -1.62
SRGAP3O43295 AC092017.2-201ENST00000427600 362 ntBASIC4.92□□□□□ -1.62
SRGAP3O43295 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.92□□□□□ -1.62
SRGAP3O43295 AC083863.1-201ENST00000438811 231 ntBASIC4.92□□□□□ -1.62
SRGAP3O43295 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.92□□□□□ -1.62
SRGAP3O43295 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.92□□□□□ -1.62
SRGAP3O43295 RPS29P15-201ENST00000458329 171 ntBASIC4.92□□□□□ -1.62
SRGAP3O43295 Y_RNA.639-201ENST00000458981 102 ntBASIC4.92□□□□□ -1.62
SRGAP3O43295 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.92□□□□□ -1.62
SRGAP3O43295 RPL31P61-201ENST00000496160 376 ntBASIC4.92□□□□□ -1.62
SRGAP3O43295 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.92□□□□□ -1.62
SRGAP3O43295 AC105417.1-201ENST00000514691 285 ntBASIC4.92□□□□□ -1.62
SRGAP3O43295 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.92□□□□□ -1.62
SRGAP3O43295 Y_RNA.665-201ENST00000516177 98 ntBASIC4.92□□□□□ -1.62
SRGAP3O43295 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.92□□□□□ -1.62
SRGAP3O43295 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.92□□□□□ -1.62
SRGAP3O43295 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.92□□□□□ -1.62
SRGAP3O43295 RPL7P20-201ENST00000520308 745 ntBASIC4.92□□□□□ -1.62
SRGAP3O43295 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.92□□□□□ -1.62
SRGAP3O43295 RPL21P12-201ENST00000559810 515 ntBASIC4.92□□□□□ -1.62
SRGAP3O43295 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.92□□□□□ -1.62
SRGAP3O43295 AC006270.2-201ENST00000578523 652 ntBASIC4.92□□□□□ -1.62
SRGAP3O43295 MIR4286-201ENST00000580651 93 ntBASIC4.92□□□□□ -1.62
SRGAP3O43295 AC105224.1-201ENST00000587055 421 ntBASIC4.92□□□□□ -1.62
SRGAP3O43295 SNRPGP17-201ENST00000603780 214 ntBASIC4.92□□□□□ -1.62
SRGAP3O43295 AL627309.6-201ENST00000606857 840 ntBASIC4.92□□□□□ -1.62
SRGAP3O43295 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.92□□□□□ -1.62
SRGAP3O43295 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.92□□□□□ -1.62
SRGAP3O43295 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SRGAP3O43295 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.92□□□□□ -1.62
SRGAP3O43295 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SRGAP3O43295 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SRGAP3O43295 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SRGAP3O43295 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SRGAP3O43295 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.91□□□□□ -1.62
SRGAP3O43295 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.91□□□□□ -1.62
SRGAP3O43295 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.91□□□□□ -1.62
SRGAP3O43295 OR1S2-201ENST00000302592 978 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SRGAP3O43295 Y_RNA.145-201ENST00000363527 102 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 RN7SKP280-201ENST00000364196 304 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 RNY3P13-201ENST00000365542 102 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 MIR514A2-201ENST00000385131 88 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 MIR514A3-201ENST00000385132 88 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 U3.20-201ENST00000390909 217 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 RPL5P18-201ENST00000406671 891 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.91□□□□□ -1.62
SRGAP3O43295 RPL7AP73-201ENST00000413490 353 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.91□□□□□ -1.62
SRGAP3O43295 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.91□□□□□ -1.62
SRGAP3O43295 ELOCP18-201ENST00000434209 337 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.91□□□□□ -1.62
SRGAP3O43295 TIMM9P1-201ENST00000436122 256 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 AC093156.1-201ENST00000440382 670 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 NANOGP10-201ENST00000453325 895 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.91□□□□□ -1.62
SRGAP3O43295 AC093767.1-201ENST00000504523 156 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.91□□□□□ -1.62
SRGAP3O43295 AC087369.1-201ENST00000520775 996 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 OR5B10P-201ENST00000532869 642 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 OR5BN1P-201ENST00000532955 829 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.91□□□□□ -1.62
SRGAP3O43295 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.91□□□□□ -1.62
SRGAP3O43295 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.91□□□□□ -1.62
SRGAP3O43295 AC128657.1-201ENST00000549459 145 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.91□□□□□ -1.62
SRGAP3O43295 GNRHR2P1-201ENST00000555315 631 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SRGAP3O43295 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.91□□□□□ -1.62
SRGAP3O43295 RPL23AP92-201ENST00000603609 255 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 AC136443.5-201ENST00000603741 370 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 AC106900.2-201ENST00000604994 317 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 AC016925.2-201ENST00000605108 242 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 AL121992.2-201ENST00000606262 256 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 AL022345.1-201ENST00000607292 135 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.91□□□□□ -1.62
SRGAP3O43295 uc_338.12-201ENST00000616344 181 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SRGAP3O43295 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.91□□□□□ -1.62
SRGAP3O43295 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SRGAP3O43295 AC016588.2-201ENST00000632484 3021 ntBASIC4.91□□□□□ -1.62
SRGAP3O43295 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms